Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SRP9P49458 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.84□□□□□ -0.35
SRP9P49458 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SRP9P49458 TPM3P8-201ENST00000330554 643 ntBASIC12.84□□□□□ -0.35
SRP9P49458 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
SRP9P49458 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SRP9P49458 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SRP9P49458 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.84□□□□□ -0.35
SRP9P49458 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.84□□□□□ -0.35
SRP9P49458 HIST1H2BPS3-201ENST00000419683 341 ntBASIC12.84□□□□□ -0.35
SRP9P49458 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SRP9P49458 GPR53P-205ENST00000457298 1084 ntBASIC12.84□□□□□ -0.35
SRP9P49458 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC12.84□□□□□ -0.35
SRP9P49458 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
SRP9P49458 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SRP9P49458 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC12.84□□□□□ -0.35
SRP9P49458 RPL28-206ENST00000558752 671 ntTSL 3 BASIC12.84□□□□□ -0.35
SRP9P49458 RAB43P1-201ENST00000561790 589 ntBASIC12.84□□□□□ -0.35
SRP9P49458 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC12.84□□□□□ -0.35
SRP9P49458 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC12.84□□□□□ -0.35
SRP9P49458 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.84□□□□□ -0.35
SRP9P49458 AL157996.1-201ENST00000624684 2299 ntBASIC12.84□□□□□ -0.35
SRP9P49458 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
SRP9P49458 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SRP9P49458 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SRP9P49458 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC12.84□□□□□ -0.35
SRP9P49458 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SRP9P49458 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC12.84□□□□□ -0.35
SRP9P49458 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SRP9P49458 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SRP9P49458 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.84□□□□□ -0.35
SRP9P49458 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SRP9P49458 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SRP9P49458 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SRP9P49458 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
SRP9P49458 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SRP9P49458 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
SRP9P49458 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.84□□□□□ -0.35
SRP9P49458 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.84□□□□□ -0.35
SRP9P49458 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SRP9P49458 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SRP9P49458 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SRP9P49458 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.35
SRP9P49458 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC12.83□□□□□ -0.35
SRP9P49458 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SRP9P49458 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC12.83□□□□□ -0.35
SRP9P49458 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
SRP9P49458 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC12.83□□□□□ -0.35
SRP9P49458 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
SRP9P49458 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.35
SRP9P49458 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SRP9P49458 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
SRP9P49458 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SRP9P49458 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
SRP9P49458 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SRP9P49458 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SRP9P49458 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SRP9P49458 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SRP9P49458 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SRP9P49458 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SRP9P49458 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC12.83□□□□□ -0.36
SRP9P49458 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SRP9P49458 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SRP9P49458 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SRP9P49458 ZBTB12BP-201ENST00000314232 1122 ntBASIC12.83□□□□□ -0.36
SRP9P49458 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC12.83□□□□□ -0.36
SRP9P49458 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SRP9P49458 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
SRP9P49458 MXI1-205ENST00000393134 889 ntTSL 2 BASIC12.83□□□□□ -0.36
SRP9P49458 AC092933.1-201ENST00000393644 945 ntBASIC12.83□□□□□ -0.36
SRP9P49458 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC12.83□□□□□ -0.36
SRP9P49458 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SRP9P49458 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
SRP9P49458 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SRP9P49458 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC12.83□□□□□ -0.36
SRP9P49458 EIF3FP3-201ENST00000434851 1086 ntBASIC12.83□□□□□ -0.36
SRP9P49458 AC245100.3-201ENST00000441281 285 ntBASIC12.83□□□□□ -0.36
SRP9P49458 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SRP9P49458 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC12.83□□□□□ -0.36
SRP9P49458 AC007551.1-201ENST00000457394 519 ntBASIC12.83□□□□□ -0.36
SRP9P49458 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
SRP9P49458 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC12.83□□□□□ -0.36
SRP9P49458 KRT17P8-201ENST00000540749 863 ntBASIC12.83□□□□□ -0.36
SRP9P49458 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC12.83□□□□□ -0.36
SRP9P49458 AC025279.2-201ENST00000569730 653 ntBASIC12.83□□□□□ -0.36
SRP9P49458 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SRP9P49458 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC12.83□□□□□ -0.36
SRP9P49458 LARP4-220ENST00000615080 856 ntTSL 5 BASIC12.83□□□□□ -0.36
SRP9P49458 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC12.83□□□□□ -0.36
SRP9P49458 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
SRP9P49458 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.83□□□□□ -0.36
SRP9P49458 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SRP9P49458 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.83□□□□□ -0.36
SRP9P49458 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC12.83□□□□□ -0.36
SRP9P49458 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SRP9P49458 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.83□□□□□ -0.36
SRP9P49458 AC092053.3-201ENST00000641308 4975 ntBASIC12.83□□□□□ -0.36
SRP9P49458 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SRP9P49458 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SRP9P49458 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms