Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CENPAP49450 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CENPAP49450 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CENPAP49450 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.15□□□□□ -0.3
CENPAP49450 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.15□□□□□ -0.3
CENPAP49450 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CENPAP49450 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CENPAP49450 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CENPAP49450 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC13.15□□□□□ -0.3
CENPAP49450 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CENPAP49450 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CENPAP49450 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CENPAP49450 ZNF283-209ENST00000618787 5713 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CENPAP49450 AC011498.7-201ENST00000624986 2027 ntBASIC13.15□□□□□ -0.3
CENPAP49450 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CENPAP49450 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CENPAP49450 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CENPAP49450 PARP3-202ENST00000417220 2472 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
CENPAP49450 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC13.15□□□□□ -0.3
CENPAP49450 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC13.15□□□□□ -0.3
CENPAP49450 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.15□□□□□ -0.3
CENPAP49450 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CENPAP49450 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
CENPAP49450 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CENPAP49450 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CENPAP49450 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CENPAP49450 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CENPAP49450 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CENPAP49450 AC012441.1-201ENST00000446669 685 ntBASIC13.15□□□□□ -0.3
CENPAP49450 AC068587.3-201ENST00000526613 355 ntBASIC13.15□□□□□ -0.3
CENPAP49450 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.15□□□□□ -0.3
CENPAP49450 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.15□□□□□ -0.3
CENPAP49450 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CENPAP49450 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CENPAP49450 RN7SL48P-201ENST00000579283 293 ntBASIC13.15□□□□□ -0.3
CENPAP49450 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.15□□□□□ -0.3
CENPAP49450 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
CENPAP49450 AC010319.3-201ENST00000597028 470 ntBASIC13.15□□□□□ -0.3
CENPAP49450 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CENPAP49450 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CENPAP49450 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CENPAP49450 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CENPAP49450 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.15□□□□□ -0.3
CENPAP49450 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CENPAP49450 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CENPAP49450 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CENPAP49450 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CENPAP49450 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
CENPAP49450 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CENPAP49450 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.31
CENPAP49450 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.31
CENPAP49450 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
CENPAP49450 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
CENPAP49450 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
CENPAP49450 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CENPAP49450 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC13.14□□□□□ -0.31
CENPAP49450 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CENPAP49450 AC139712.1-201ENST00000378256 1875 ntBASIC13.14□□□□□ -0.31
CENPAP49450 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CENPAP49450 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CENPAP49450 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.14□□□□□ -0.31
CENPAP49450 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CENPAP49450 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CENPAP49450 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC13.14□□□□□ -0.31
CENPAP49450 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CENPAP49450 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC13.14□□□□□ -0.31
CENPAP49450 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.14□□□□□ -0.31
CENPAP49450 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CENPAP49450 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CENPAP49450 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CENPAP49450 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.14□□□□□ -0.31
CENPAP49450 AC011481.3-201ENST00000623895 5594 ntBASIC13.14□□□□□ -0.31
CENPAP49450 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CENPAP49450 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CENPAP49450 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CENPAP49450 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CENPAP49450 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CENPAP49450 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CENPAP49450 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CENPAP49450 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CENPAP49450 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CENPAP49450 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CENPAP49450 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CENPAP49450 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CENPAP49450 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.14□□□□□ -0.31
CENPAP49450 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.14□□□□□ -0.31
CENPAP49450 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.14□□□□□ -0.31
CENPAP49450 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.14□□□□□ -0.31
CENPAP49450 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CENPAP49450 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.14□□□□□ -0.31
CENPAP49450 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CENPAP49450 RN7SL752P-201ENST00000463779 287 ntBASIC13.14□□□□□ -0.31
CENPAP49450 TMEM198B-204ENST00000484016 896 ntBASIC13.14□□□□□ -0.31
CENPAP49450 FTLP10-202ENST00000505798 471 ntBASIC13.14□□□□□ -0.31
CENPAP49450 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CENPAP49450 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
CENPAP49450 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.14□□□□□ -0.31
CENPAP49450 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CENPAP49450 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CENPAP49450 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms