Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.68□□□□□ -0.06
FDFT1P37268 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
FDFT1P37268 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
FDFT1P37268 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.68□□□□□ -0.06
FDFT1P37268 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC14.68□□□□□ -0.06
FDFT1P37268 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
FDFT1P37268 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
FDFT1P37268 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
FDFT1P37268 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
FDFT1P37268 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
FDFT1P37268 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
FDFT1P37268 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC14.67□□□□□ -0.06
FDFT1P37268 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
FDFT1P37268 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
FDFT1P37268 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
FDFT1P37268 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
FDFT1P37268 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
FDFT1P37268 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
FDFT1P37268 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
FDFT1P37268 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
FDFT1P37268 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
FDFT1P37268 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
FDFT1P37268 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.67□□□□□ -0.06
FDFT1P37268 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
FDFT1P37268 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
FDFT1P37268 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14.67□□□□□ -0.06
FDFT1P37268 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.67□□□□□ -0.06
FDFT1P37268 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
FDFT1P37268 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.67□□□□□ -0.06
FDFT1P37268 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.67□□□□□ -0.06
FDFT1P37268 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.67□□□□□ -0.06
FDFT1P37268 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.67□□□□□ -0.06
FDFT1P37268 AGER-214ENST00000538695 487 ntTSL 2 BASIC14.67□□□□□ -0.06
FDFT1P37268 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.67□□□□□ -0.06
FDFT1P37268 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.67□□□□□ -0.06
FDFT1P37268 AL162274.1-201ENST00000617191 1098 ntBASIC14.67□□□□□ -0.06
FDFT1P37268 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
FDFT1P37268 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC14.67□□□□□ -0.06
FDFT1P37268 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
FDFT1P37268 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
FDFT1P37268 HADH-202ENST00000403312 1752 ntTSL 5 BASIC14.67□□□□□ -0.06
FDFT1P37268 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
FDFT1P37268 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
FDFT1P37268 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
FDFT1P37268 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
FDFT1P37268 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
FDFT1P37268 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.67□□□□□ -0.06
FDFT1P37268 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
FDFT1P37268 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
FDFT1P37268 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.66□□□□□ -0.06
FDFT1P37268 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
FDFT1P37268 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
FDFT1P37268 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
FDFT1P37268 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
FDFT1P37268 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
FDFT1P37268 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
FDFT1P37268 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
FDFT1P37268 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
FDFT1P37268 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
FDFT1P37268 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
FDFT1P37268 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
FDFT1P37268 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
FDFT1P37268 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
FDFT1P37268 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
FDFT1P37268 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
FDFT1P37268 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
FDFT1P37268 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.66□□□□□ -0.06
FDFT1P37268 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
FDFT1P37268 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.66□□□□□ -0.06
FDFT1P37268 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.66□□□□□ -0.06
FDFT1P37268 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
FDFT1P37268 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.66□□□□□ -0.06
FDFT1P37268 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
FDFT1P37268 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.66□□□□□ -0.06
FDFT1P37268 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
FDFT1P37268 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC14.66□□□□□ -0.06
FDFT1P37268 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
FDFT1P37268 AC022217.1-201ENST00000521069 738 ntBASIC14.66□□□□□ -0.06
FDFT1P37268 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
FDFT1P37268 KRT17P8-201ENST00000540749 863 ntBASIC14.66□□□□□ -0.06
FDFT1P37268 AL512310.5-201ENST00000551999 515 ntBASIC14.66□□□□□ -0.06
FDFT1P37268 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.66□□□□□ -0.06
FDFT1P37268 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.66□□□□□ -0.06
FDFT1P37268 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.66□□□□□ -0.06
FDFT1P37268 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
FDFT1P37268 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.66□□□□□ -0.06
FDFT1P37268 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14.66□□□□□ -0.06
FDFT1P37268 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.66□□□□□ -0.06
FDFT1P37268 AL591471.1-201ENST00000621855 229 ntBASIC14.66□□□□□ -0.06
FDFT1P37268 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
FDFT1P37268 RPL35-206ENST00000629845 340 ntTSL 5 BASIC14.66□□□□□ -0.06
FDFT1P37268 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
FDFT1P37268 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
FDFT1P37268 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
FDFT1P37268 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.66□□□□□ -0.06
FDFT1P37268 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC14.66□□□□□ -0.06
FDFT1P37268 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
FDFT1P37268 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
FDFT1P37268 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC14.66□□□□□ -0.06
FDFT1P37268 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms