Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC16.41■□□□□ 0.22
CLCN1P35523 CA10-202ENST00000442502 2935 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLCN1P35523 AC021752.1-202ENST00000613161 2398 ntTSL 2 BASIC16.41■□□□□ 0.22
CLCN1P35523 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLCN1P35523 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.41■□□□□ 0.22
CLCN1P35523 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.41■□□□□ 0.22
CLCN1P35523 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CLCN1P35523 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CLCN1P35523 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.41■□□□□ 0.22
CLCN1P35523 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.41■□□□□ 0.22
CLCN1P35523 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.41■□□□□ 0.22
CLCN1P35523 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.41■□□□□ 0.22
CLCN1P35523 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.41■□□□□ 0.22
CLCN1P35523 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLCN1P35523 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLCN1P35523 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.41■□□□□ 0.22
CLCN1P35523 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CLCN1P35523 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.41■□□□□ 0.22
CLCN1P35523 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.41■□□□□ 0.22
CLCN1P35523 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.41■□□□□ 0.22
CLCN1P35523 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CLCN1P35523 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.41■□□□□ 0.22
CLCN1P35523 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLCN1P35523 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLCN1P35523 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.41■□□□□ 0.22
CLCN1P35523 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
CLCN1P35523 HDAC8-207ENST00000373573 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLCN1P35523 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC16.41■□□□□ 0.22
CLCN1P35523 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLCN1P35523 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLCN1P35523 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CLCN1P35523 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLCN1P35523 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.41■□□□□ 0.22
CLCN1P35523 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLCN1P35523 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLCN1P35523 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLCN1P35523 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN1P35523 BANK1-202ENST00000428908 3044 ntTSL 5 BASIC16.4■□□□□ 0.22
CLCN1P35523 MZF1-AS1-202ENST00000600534 2567 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN1P35523 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CLCN1P35523 SLC7A15P-201ENST00000424028 1363 ntBASIC16.4■□□□□ 0.22
CLCN1P35523 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN1P35523 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN1P35523 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN1P35523 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.4■□□□□ 0.22
CLCN1P35523 HERC6-202ENST00000273960 3473 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN1P35523 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC16.4■□□□□ 0.22
CLCN1P35523 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN1P35523 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.4■□□□□ 0.22
CLCN1P35523 AC004066.1-201ENST00000502488 802 ntBASIC16.4■□□□□ 0.22
CLCN1P35523 SERBP1P5-201ENST00000510079 1181 ntBASIC16.4■□□□□ 0.22
CLCN1P35523 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.4■□□□□ 0.22
CLCN1P35523 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN1P35523 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.4■□□□□ 0.22
CLCN1P35523 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.4■□□□□ 0.22
CLCN1P35523 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.4■□□□□ 0.22
CLCN1P35523 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN1P35523 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN1P35523 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.4■□□□□ 0.22
CLCN1P35523 AL049840.4-201ENST00000602422 811 ntBASIC16.4■□□□□ 0.22
CLCN1P35523 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN1P35523 FAM214B-204ENST00000378566 2566 ntTSL 2 BASIC16.4■□□□□ 0.22
CLCN1P35523 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.4■□□□□ 0.22
CLCN1P35523 MATN2-211ENST00000521689 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN1P35523 UBTFL8-201ENST00000426903 2112 ntBASIC16.4■□□□□ 0.22
CLCN1P35523 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CLCN1P35523 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN1P35523 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN1P35523 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN1P35523 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN1P35523 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN1P35523 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CLCN1P35523 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLCN1P35523 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC16.39■□□□□ 0.22
CLCN1P35523 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CLCN1P35523 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
CLCN1P35523 SLC44A4-202ENST00000229729 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CLCN1P35523 PLOD2-209ENST00000494950 2908 ntTSL 2 BASIC16.39■□□□□ 0.21
CLCN1P35523 KIF9-207ENST00000444589 2791 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN1P35523 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CLCN1P35523 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CLCN1P35523 GNPDA1-210ENST00000508177 2980 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN1P35523 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN1P35523 OFD1-203ENST00000380567 3736 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CLCN1P35523 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN1P35523 AL157414.3-201ENST00000624276 1954 ntBASIC16.39■□□□□ 0.21
CLCN1P35523 PTGR2-204ENST00000555228 2543 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CLCN1P35523 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN1P35523 AL359845.1-201ENST00000458202 1648 ntBASIC16.39■□□□□ 0.21
CLCN1P35523 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN1P35523 KCNK10-202ENST00000319231 2725 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN1P35523 MAGED1-201ENST00000326587 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN1P35523 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN1P35523 MIR661-201ENST00000384842 89 ntBASIC16.39■□□□□ 0.21
CLCN1P35523 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CLCN1P35523 AC012497.1-201ENST00000429392 575 ntBASIC16.39■□□□□ 0.21
CLCN1P35523 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.39■□□□□ 0.21
CLCN1P35523 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.39■□□□□ 0.21
CLCN1P35523 VDAC1P7-201ENST00000462417 847 ntBASIC16.39■□□□□ 0.21
CLCN1P35523 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms