Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CTNNA1P35221 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTNNA1P35221 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTNNA1P35221 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CTNNA1P35221 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC15.24■□□□□ 0.03
CTNNA1P35221 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTNNA1P35221 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CTNNA1P35221 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CTNNA1P35221 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CTNNA1P35221 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.24■□□□□ 0.03
CTNNA1P35221 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTNNA1P35221 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTNNA1P35221 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CTNNA1P35221 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CTNNA1P35221 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CTNNA1P35221 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CTNNA1P35221 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.24■□□□□ 0.03
CTNNA1P35221 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC15.23■□□□□ 0.03
CTNNA1P35221 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CTNNA1P35221 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTNNA1P35221 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CTNNA1P35221 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CTNNA1P35221 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC15.23■□□□□ 0.03
CTNNA1P35221 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CTNNA1P35221 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CTNNA1P35221 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC15.23■□□□□ 0.03
CTNNA1P35221 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CTNNA1P35221 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTNNA1P35221 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC15.23■□□□□ 0.03
CTNNA1P35221 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC15.23■□□□□ 0.03
CTNNA1P35221 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC15.23■□□□□ 0.03
CTNNA1P35221 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTNNA1P35221 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
CTNNA1P35221 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
CTNNA1P35221 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTNNA1P35221 TNN-202ENST00000621086 4234 ntTSL 5 BASIC15.23■□□□□ 0.03
CTNNA1P35221 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC15.23■□□□□ 0.03
CTNNA1P35221 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.23■□□□□ 0.03
CTNNA1P35221 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTNNA1P35221 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.23■□□□□ 0.03
CTNNA1P35221 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTNNA1P35221 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTNNA1P35221 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CTNNA1P35221 AP006294.1-201ENST00000415407 339 ntBASIC15.23■□□□□ 0.03
CTNNA1P35221 CD8B2-202ENST00000417670 633 ntBASIC15.23■□□□□ 0.03
CTNNA1P35221 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.23■□□□□ 0.03
CTNNA1P35221 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.23■□□□□ 0.03
CTNNA1P35221 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CTNNA1P35221 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.23■□□□□ 0.03
CTNNA1P35221 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.23■□□□□ 0.03
CTNNA1P35221 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.23■□□□□ 0.03
CTNNA1P35221 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.23■□□□□ 0.03
CTNNA1P35221 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.23■□□□□ 0.03
CTNNA1P35221 AC008825.2-201ENST00000603374 718 ntBASIC15.23■□□□□ 0.03
CTNNA1P35221 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.23■□□□□ 0.03
CTNNA1P35221 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.23■□□□□ 0.03
CTNNA1P35221 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CTNNA1P35221 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC15.23■□□□□ 0.03
CTNNA1P35221 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CTNNA1P35221 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
CTNNA1P35221 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CTNNA1P35221 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CTNNA1P35221 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTNNA1P35221 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CTNNA1P35221 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTNNA1P35221 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CTNNA1P35221 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTNNA1P35221 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CTNNA1P35221 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTNNA1P35221 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CTNNA1P35221 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTNNA1P35221 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CTNNA1P35221 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CTNNA1P35221 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CTNNA1P35221 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CTNNA1P35221 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CTNNA1P35221 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CTNNA1P35221 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CTNNA1P35221 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC15.22■□□□□ 0.03
CTNNA1P35221 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CTNNA1P35221 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CTNNA1P35221 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CTNNA1P35221 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CTNNA1P35221 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CTNNA1P35221 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.22■□□□□ 0.03
CTNNA1P35221 C2orf27AP3-201ENST00000434123 579 ntBASIC15.22■□□□□ 0.03
CTNNA1P35221 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CTNNA1P35221 RN7SL837P-201ENST00000463010 287 ntBASIC15.22■□□□□ 0.03
CTNNA1P35221 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.22■□□□□ 0.03
CTNNA1P35221 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC15.22■□□□□ 0.03
CTNNA1P35221 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CTNNA1P35221 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.22■□□□□ 0.03
CTNNA1P35221 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CTNNA1P35221 AC073413.1-201ENST00000603927 732 ntBASIC15.22■□□□□ 0.03
CTNNA1P35221 AL358472.3-201ENST00000608147 415 ntBASIC15.22■□□□□ 0.03
CTNNA1P35221 BAP1-211ENST00000615113 489 ntBASIC15.22■□□□□ 0.03
CTNNA1P35221 AL354718.3-201ENST00000616414 581 ntBASIC15.22■□□□□ 0.03
CTNNA1P35221 AC027601.3-201ENST00000622907 509 ntBASIC15.22■□□□□ 0.03
CTNNA1P35221 CR382287.1-201ENST00000623954 586 ntBASIC15.22■□□□□ 0.03
CTNNA1P35221 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms