Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ATF1P18846 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATF1P18846 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.66□□□□□ -0.38
ATF1P18846 AL590440.2-201ENST00000641973 1595 ntBASIC12.66□□□□□ -0.38
ATF1P18846 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATF1P18846 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATF1P18846 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ATF1P18846 MIR661-201ENST00000384842 89 ntBASIC12.66□□□□□ -0.38
ATF1P18846 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATF1P18846 AL391647.1-201ENST00000395664 511 ntBASIC12.66□□□□□ -0.38
ATF1P18846 PIN1P1-201ENST00000412108 996 ntBASIC12.66□□□□□ -0.38
ATF1P18846 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATF1P18846 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC12.66□□□□□ -0.38
ATF1P18846 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC12.66□□□□□ -0.38
ATF1P18846 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
ATF1P18846 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC12.66□□□□□ -0.38
ATF1P18846 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATF1P18846 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
ATF1P18846 PTP4A1P2-201ENST00000546033 454 ntBASIC12.66□□□□□ -0.38
ATF1P18846 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ATF1P18846 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC12.66□□□□□ -0.38
ATF1P18846 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC12.66□□□□□ -0.38
ATF1P18846 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATF1P18846 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.66□□□□□ -0.38
ATF1P18846 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATF1P18846 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATF1P18846 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ATF1P18846 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATF1P18846 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATF1P18846 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
ATF1P18846 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATF1P18846 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
ATF1P18846 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
ATF1P18846 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATF1P18846 PEG13-201ENST00000631594 5667 ntBASIC12.66□□□□□ -0.38
ATF1P18846 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.66□□□□□ -0.38
ATF1P18846 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC12.66□□□□□ -0.38
ATF1P18846 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC12.66□□□□□ -0.38
ATF1P18846 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATF1P18846 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
ATF1P18846 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC12.65□□□□□ -0.38
ATF1P18846 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ATF1P18846 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ATF1P18846 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
ATF1P18846 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ATF1P18846 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ATF1P18846 MSTO2P-201ENST00000314835 1709 ntBASIC12.65□□□□□ -0.38
ATF1P18846 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ATF1P18846 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC12.65□□□□□ -0.38
ATF1P18846 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
ATF1P18846 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
ATF1P18846 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ATF1P18846 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ATF1P18846 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ATF1P18846 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.65□□□□□ -0.38
ATF1P18846 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
ATF1P18846 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
ATF1P18846 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ATF1P18846 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ATF1P18846 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ATF1P18846 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ATF1P18846 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ATF1P18846 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ATF1P18846 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC12.65□□□□□ -0.38
ATF1P18846 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ATF1P18846 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ATF1P18846 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC12.65□□□□□ -0.38
ATF1P18846 GOLGA6L11P-201ENST00000417252 1298 ntBASIC12.65□□□□□ -0.38
ATF1P18846 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC12.65□□□□□ -0.38
ATF1P18846 ACTG1P3-201ENST00000431775 1114 ntBASIC12.65□□□□□ -0.38
ATF1P18846 PNKD-204ENST00000436005 978 ntTSL 5 BASIC12.65□□□□□ -0.38
ATF1P18846 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC12.65□□□□□ -0.38
ATF1P18846 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC12.65□□□□□ -0.38
ATF1P18846 AL391280.1-201ENST00000506969 1062 ntBASIC12.65□□□□□ -0.38
ATF1P18846 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC12.65□□□□□ -0.38
ATF1P18846 KRT18P8-201ENST00000581937 1246 ntBASIC12.65□□□□□ -0.38
ATF1P18846 RN7SL204P-201ENST00000582831 262 ntBASIC12.65□□□□□ -0.38
ATF1P18846 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC12.65□□□□□ -0.38
ATF1P18846 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ATF1P18846 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC12.65□□□□□ -0.38
ATF1P18846 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
ATF1P18846 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC12.65□□□□□ -0.38
ATF1P18846 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ATF1P18846 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
ATF1P18846 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
ATF1P18846 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
ATF1P18846 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC12.65□□□□□ -0.38
ATF1P18846 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC12.65□□□□□ -0.38
ATF1P18846 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ATF1P18846 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC12.65□□□□□ -0.38
ATF1P18846 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC12.65□□□□□ -0.38
ATF1P18846 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
ATF1P18846 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
ATF1P18846 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
ATF1P18846 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
ATF1P18846 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
ATF1P18846 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
ATF1P18846 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC12.65□□□□□ -0.39
ATF1P18846 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
ATF1P18846 PCDHA5-203ENST00000614258 4248 ntBASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms