Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CD28P10747 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
CD28P10747 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
CD28P10747 AL807761.2-201ENST00000422849 729 ntBASIC11.27□□□□□ -0.61
CD28P10747 DNAJB1P1-201ENST00000429417 1024 ntBASIC11.27□□□□□ -0.61
CD28P10747 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC11.27□□□□□ -0.61
CD28P10747 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC11.27□□□□□ -0.61
CD28P10747 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CD28P10747 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC11.27□□□□□ -0.61
CD28P10747 AC079112.1-201ENST00000454972 939 ntBASIC11.27□□□□□ -0.61
CD28P10747 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CD28P10747 RN7SL530P-201ENST00000485097 298 ntBASIC11.27□□□□□ -0.61
CD28P10747 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC11.27□□□□□ -0.61
CD28P10747 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CD28P10747 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CD28P10747 FOS-204ENST00000554617 796 ntTSL 2 BASIC11.27□□□□□ -0.61
CD28P10747 TPM1-223ENST00000560445 485 ntTSL 3 BASIC11.27□□□□□ -0.61
CD28P10747 AC135983.4-201ENST00000564116 1262 ntBASIC11.27□□□□□ -0.61
CD28P10747 AC093752.3-201ENST00000567343 901 ntBASIC11.27□□□□□ -0.61
CD28P10747 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC11.27□□□□□ -0.61
CD28P10747 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC11.27□□□□□ -0.61
CD28P10747 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC11.27□□□□□ -0.61
CD28P10747 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CD28P10747 RN7SL736P-201ENST00000613111 269 ntBASIC11.27□□□□□ -0.61
CD28P10747 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
CD28P10747 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
CD28P10747 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CD28P10747 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CD28P10747 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CD28P10747 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
CD28P10747 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CD28P10747 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC11.27□□□□□ -0.61
CD28P10747 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC11.27□□□□□ -0.61
CD28P10747 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CD28P10747 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
CD28P10747 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CD28P10747 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CD28P10747 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC11.27□□□□□ -0.61
CD28P10747 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC11.27□□□□□ -0.61
CD28P10747 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
CD28P10747 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CD28P10747 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC11.27□□□□□ -0.61
CD28P10747 CICP24-201ENST00000605464 2705 ntBASIC11.27□□□□□ -0.61
CD28P10747 RER1-203ENST00000378513 3000 ntTSL 3 BASIC11.27□□□□□ -0.61
CD28P10747 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CD28P10747 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
CD28P10747 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
CD28P10747 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC11.27□□□□□ -0.61
CD28P10747 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC11.27□□□□□ -0.61
CD28P10747 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
CD28P10747 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CD28P10747 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
CD28P10747 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CD28P10747 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC11.26□□□□□ -0.61
CD28P10747 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC11.26□□□□□ -0.61
CD28P10747 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC11.26□□□□□ -0.61
CD28P10747 AC018442.1-201ENST00000421439 2061 ntBASIC11.26□□□□□ -0.61
CD28P10747 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC11.26□□□□□ -0.61
CD28P10747 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC11.26□□□□□ -0.61
CD28P10747 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CD28P10747 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CD28P10747 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
CD28P10747 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CD28P10747 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC11.26□□□□□ -0.61
CD28P10747 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
CD28P10747 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC11.26□□□□□ -0.61
CD28P10747 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CD28P10747 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CD28P10747 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
CD28P10747 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC11.26□□□□□ -0.61
CD28P10747 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
CD28P10747 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CD28P10747 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC11.26□□□□□ -0.61
CD28P10747 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC11.26□□□□□ -0.61
CD28P10747 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CD28P10747 DUTP3-201ENST00000450025 415 ntBASIC11.26□□□□□ -0.61
CD28P10747 RN7SL8P-201ENST00000461771 266 ntBASIC11.26□□□□□ -0.61
CD28P10747 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC11.26□□□□□ -0.61
CD28P10747 RHEB-207ENST00000496004 744 ntTSL 2 BASIC11.26□□□□□ -0.61
CD28P10747 AP002803.1-201ENST00000528836 498 ntBASIC11.26□□□□□ -0.61
CD28P10747 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC11.26□□□□□ -0.61
CD28P10747 DRG2-220ENST00000583355 891 ntTSL 3 BASIC11.26□□□□□ -0.61
CD28P10747 MIR4522-201ENST00000584932 87 ntBASIC11.26□□□□□ -0.61
CD28P10747 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC11.26□□□□□ -0.61
CD28P10747 SIGLEC18P-201ENST00000602271 909 ntBASIC11.26□□□□□ -0.61
CD28P10747 AC138894.2-201ENST00000602838 371 ntBASIC11.26□□□□□ -0.61
CD28P10747 AL022334.2-201ENST00000610000 484 ntBASIC11.26□□□□□ -0.61
CD28P10747 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC11.26□□□□□ -0.61
CD28P10747 AC242376.2-201ENST00000619355 883 ntBASIC11.26□□□□□ -0.61
CD28P10747 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
CD28P10747 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC11.26□□□□□ -0.61
CD28P10747 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC11.26□□□□□ -0.61
CD28P10747 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
CD28P10747 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC11.26□□□□□ -0.61
CD28P10747 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CD28P10747 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CD28P10747 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
CD28P10747 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC11.26□□□□□ -0.61
CD28P10747 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
CD28P10747 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms