Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
FAM228BP0C875 RET-205ENST00000615310 4337 ntTSL 5 BASIC15.31■□□□□ 0.04
FAM228BP0C875 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
FAM228BP0C875 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
FAM228BP0C875 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FAM228BP0C875 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.31■□□□□ 0.04
FAM228BP0C875 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
FAM228BP0C875 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FAM228BP0C875 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FAM228BP0C875 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FAM228BP0C875 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FAM228BP0C875 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
FAM228BP0C875 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.31■□□□□ 0.04
FAM228BP0C875 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC15.31■□□□□ 0.04
FAM228BP0C875 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
FAM228BP0C875 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
FAM228BP0C875 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FAM228BP0C875 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
FAM228BP0C875 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FAM228BP0C875 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FAM228BP0C875 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
FAM228BP0C875 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
FAM228BP0C875 COX5BP8-201ENST00000416911 349 ntBASIC15.31■□□□□ 0.04
FAM228BP0C875 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.31■□□□□ 0.04
FAM228BP0C875 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
FAM228BP0C875 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
FAM228BP0C875 CROCCP4-201ENST00000457096 498 ntBASIC15.31■□□□□ 0.04
FAM228BP0C875 KRT18P15-201ENST00000458108 1291 ntBASIC15.31■□□□□ 0.04
FAM228BP0C875 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.31■□□□□ 0.04
FAM228BP0C875 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.31■□□□□ 0.04
FAM228BP0C875 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.31■□□□□ 0.04
FAM228BP0C875 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.31■□□□□ 0.04
FAM228BP0C875 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.31■□□□□ 0.04
FAM228BP0C875 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC15.31■□□□□ 0.04
FAM228BP0C875 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
FAM228BP0C875 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
FAM228BP0C875 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
FAM228BP0C875 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FAM228BP0C875 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
FAM228BP0C875 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
FAM228BP0C875 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
FAM228BP0C875 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FAM228BP0C875 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC15.31■□□□□ 0.04
FAM228BP0C875 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FAM228BP0C875 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FAM228BP0C875 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC15.31■□□□□ 0.04
FAM228BP0C875 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
FAM228BP0C875 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FAM228BP0C875 F2-205ENST00000530231 1849 ntTSL 5 BASIC15.31■□□□□ 0.04
FAM228BP0C875 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC15.31■□□□□ 0.04
FAM228BP0C875 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC15.31■□□□□ 0.04
FAM228BP0C875 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
FAM228BP0C875 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC15.31■□□□□ 0.04
FAM228BP0C875 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC15.31■□□□□ 0.04
FAM228BP0C875 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FAM228BP0C875 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
FAM228BP0C875 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FAM228BP0C875 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FAM228BP0C875 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
FAM228BP0C875 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
FAM228BP0C875 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC15.3■□□□□ 0.04
FAM228BP0C875 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
FAM228BP0C875 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC15.3■□□□□ 0.04
FAM228BP0C875 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
FAM228BP0C875 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FAM228BP0C875 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FAM228BP0C875 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FAM228BP0C875 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC15.3■□□□□ 0.04
FAM228BP0C875 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
FAM228BP0C875 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC15.3■□□□□ 0.04
FAM228BP0C875 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FAM228BP0C875 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
FAM228BP0C875 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC15.3■□□□□ 0.04
FAM228BP0C875 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.3■□□□□ 0.04
FAM228BP0C875 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.3■□□□□ 0.04
FAM228BP0C875 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
FAM228BP0C875 AC026954.1-201ENST00000429771 1293 ntBASIC15.3■□□□□ 0.04
FAM228BP0C875 RPL7P3-201ENST00000441388 714 ntBASIC15.3■□□□□ 0.04
FAM228BP0C875 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.3■□□□□ 0.04
FAM228BP0C875 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.3■□□□□ 0.04
FAM228BP0C875 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
FAM228BP0C875 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.3■□□□□ 0.04
FAM228BP0C875 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC15.3■□□□□ 0.04
FAM228BP0C875 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.3■□□□□ 0.04
FAM228BP0C875 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
FAM228BP0C875 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
FAM228BP0C875 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.3■□□□□ 0.04
FAM228BP0C875 AL512310.5-201ENST00000551999 515 ntBASIC15.3■□□□□ 0.04
FAM228BP0C875 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC15.3■□□□□ 0.04
FAM228BP0C875 AC124068.2-201ENST00000569473 1109 ntBASIC15.3■□□□□ 0.04
FAM228BP0C875 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC15.3■□□□□ 0.04
FAM228BP0C875 ARL16-210ENST00000574938 751 ntTSL 2 BASIC15.3■□□□□ 0.04
FAM228BP0C875 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC15.3■□□□□ 0.04
FAM228BP0C875 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.3■□□□□ 0.04
FAM228BP0C875 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC15.3■□□□□ 0.04
FAM228BP0C875 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.3■□□□□ 0.04
FAM228BP0C875 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.3■□□□□ 0.04
FAM228BP0C875 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
FAM228BP0C875 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FAM228BP0C875 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms