Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
OPN1SWP03999 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC13.48□□□□□ -0.25
OPN1SWP03999 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
OPN1SWP03999 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.48□□□□□ -0.25
OPN1SWP03999 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
OPN1SWP03999 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.47□□□□□ -0.25
OPN1SWP03999 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
OPN1SWP03999 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
OPN1SWP03999 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
OPN1SWP03999 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
OPN1SWP03999 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
OPN1SWP03999 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
OPN1SWP03999 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
OPN1SWP03999 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.47□□□□□ -0.25
OPN1SWP03999 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
OPN1SWP03999 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
OPN1SWP03999 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
OPN1SWP03999 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.47□□□□□ -0.25
OPN1SWP03999 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.47□□□□□ -0.25
OPN1SWP03999 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC13.47□□□□□ -0.25
OPN1SWP03999 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
OPN1SWP03999 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
OPN1SWP03999 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
OPN1SWP03999 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
OPN1SWP03999 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.47□□□□□ -0.25
OPN1SWP03999 CD8B2-202ENST00000417670 633 ntBASIC13.47□□□□□ -0.25
OPN1SWP03999 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
OPN1SWP03999 BCRP2-202ENST00000447763 634 ntBASIC13.47□□□□□ -0.25
OPN1SWP03999 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
OPN1SWP03999 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.47□□□□□ -0.25
OPN1SWP03999 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC13.47□□□□□ -0.25
OPN1SWP03999 BCRP6-201ENST00000510112 632 ntBASIC13.47□□□□□ -0.25
OPN1SWP03999 BCRP7-201ENST00000511549 544 ntBASIC13.47□□□□□ -0.25
OPN1SWP03999 RNA5SP486-201ENST00000515961 83 ntBASIC13.47□□□□□ -0.25
OPN1SWP03999 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
OPN1SWP03999 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.47□□□□□ -0.25
OPN1SWP03999 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
OPN1SWP03999 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.47□□□□□ -0.25
OPN1SWP03999 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.47□□□□□ -0.25
OPN1SWP03999 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.47□□□□□ -0.25
OPN1SWP03999 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
OPN1SWP03999 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
OPN1SWP03999 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
OPN1SWP03999 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
OPN1SWP03999 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.47□□□□□ -0.25
OPN1SWP03999 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
OPN1SWP03999 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
OPN1SWP03999 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13.47□□□□□ -0.25
OPN1SWP03999 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC13.47□□□□□ -0.25
OPN1SWP03999 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
OPN1SWP03999 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
OPN1SWP03999 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
OPN1SWP03999 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
OPN1SWP03999 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
OPN1SWP03999 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
OPN1SWP03999 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
OPN1SWP03999 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
OPN1SWP03999 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
OPN1SWP03999 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
OPN1SWP03999 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.46□□□□□ -0.25
OPN1SWP03999 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
OPN1SWP03999 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
OPN1SWP03999 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
OPN1SWP03999 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
OPN1SWP03999 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
OPN1SWP03999 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
OPN1SWP03999 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC13.46□□□□□ -0.25
OPN1SWP03999 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.46□□□□□ -0.25
OPN1SWP03999 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
OPN1SWP03999 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
OPN1SWP03999 AL354989.2-201ENST00000435838 1540 ntBASIC13.46□□□□□ -0.25
OPN1SWP03999 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
OPN1SWP03999 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
OPN1SWP03999 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
OPN1SWP03999 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
OPN1SWP03999 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
OPN1SWP03999 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.46□□□□□ -0.25
OPN1SWP03999 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.46□□□□□ -0.25
OPN1SWP03999 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
OPN1SWP03999 AP006294.1-201ENST00000415407 339 ntBASIC13.46□□□□□ -0.25
OPN1SWP03999 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.46□□□□□ -0.25
OPN1SWP03999 RN7SL837P-201ENST00000463010 287 ntBASIC13.46□□□□□ -0.25
OPN1SWP03999 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.46□□□□□ -0.25
OPN1SWP03999 TERF1P3-201ENST00000505638 1227 ntBASIC13.46□□□□□ -0.25
OPN1SWP03999 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.25
OPN1SWP03999 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
OPN1SWP03999 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.46□□□□□ -0.25
OPN1SWP03999 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.46□□□□□ -0.25
OPN1SWP03999 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.46□□□□□ -0.25
OPN1SWP03999 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
OPN1SWP03999 AC132938.4-201ENST00000623835 848 ntBASIC13.46□□□□□ -0.25
OPN1SWP03999 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
OPN1SWP03999 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.46□□□□□ -0.25
OPN1SWP03999 TNN-202ENST00000621086 4234 ntTSL 5 BASIC13.46□□□□□ -0.25
OPN1SWP03999 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
OPN1SWP03999 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
OPN1SWP03999 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.46□□□□□ -0.26
OPN1SWP03999 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
OPN1SWP03999 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
OPN1SWP03999 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC13.46□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms