Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC11.11□□□□□ -0.63
TRBV12-3P01733 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TRBV12-3P01733 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TRBV12-3P01733 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
TRBV12-3P01733 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TRBV12-3P01733 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
TRBV12-3P01733 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TRBV12-3P01733 SDCCAG3P2-201ENST00000326105 1023 ntBASIC11.11□□□□□ -0.63
TRBV12-3P01733 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC11.11□□□□□ -0.63
TRBV12-3P01733 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TRBV12-3P01733 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TRBV12-3P01733 DEF8-202ENST00000418391 852 ntTSL 2 BASIC11.11□□□□□ -0.63
TRBV12-3P01733 AC092580.1-201ENST00000433998 658 ntBASIC11.11□□□□□ -0.63
TRBV12-3P01733 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC11.11□□□□□ -0.63
TRBV12-3P01733 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC11.11□□□□□ -0.63
TRBV12-3P01733 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC11.11□□□□□ -0.63
TRBV12-3P01733 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TRBV12-3P01733 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC11.11□□□□□ -0.63
TRBV12-3P01733 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
TRBV12-3P01733 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
TRBV12-3P01733 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
TRBV12-3P01733 MIR6787-201ENST00000616675 61 ntBASIC11.11□□□□□ -0.63
TRBV12-3P01733 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
TRBV12-3P01733 AC090386.2-201ENST00000623010 1039 ntBASIC11.11□□□□□ -0.63
TRBV12-3P01733 AC244452.3-201ENST00000636814 210 ntBASIC11.11□□□□□ -0.63
TRBV12-3P01733 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
TRBV12-3P01733 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
TRBV12-3P01733 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TRBV12-3P01733 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TRBV12-3P01733 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC11.11□□□□□ -0.63
TRBV12-3P01733 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TRBV12-3P01733 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC11.11□□□□□ -0.63
TRBV12-3P01733 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
TRBV12-3P01733 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
TRBV12-3P01733 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TRBV12-3P01733 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC11.11□□□□□ -0.63
TRBV12-3P01733 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TRBV12-3P01733 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC11.11□□□□□ -0.63
TRBV12-3P01733 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TRBV12-3P01733 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TRBV12-3P01733 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC11.11□□□□□ -0.63
TRBV12-3P01733 CCT8L1P-201ENST00000465400 1674 ntBASIC11.11□□□□□ -0.63
TRBV12-3P01733 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TRBV12-3P01733 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC11.11□□□□□ -0.63
TRBV12-3P01733 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TRBV12-3P01733 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TRBV12-3P01733 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TRBV12-3P01733 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
TRBV12-3P01733 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
TRBV12-3P01733 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRBV12-3P01733 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRBV12-3P01733 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRBV12-3P01733 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRBV12-3P01733 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
TRBV12-3P01733 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC11.1□□□□□ -0.63
TRBV12-3P01733 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC11.1□□□□□ -0.63
TRBV12-3P01733 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC11.1□□□□□ -0.63
TRBV12-3P01733 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
TRBV12-3P01733 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRBV12-3P01733 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRBV12-3P01733 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRBV12-3P01733 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
TRBV12-3P01733 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
TRBV12-3P01733 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
TRBV12-3P01733 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
TRBV12-3P01733 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRBV12-3P01733 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRBV12-3P01733 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC11.1□□□□□ -0.63
TRBV12-3P01733 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
TRBV12-3P01733 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRBV12-3P01733 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRBV12-3P01733 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRBV12-3P01733 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRBV12-3P01733 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
TRBV12-3P01733 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
TRBV12-3P01733 RN7SKP214-201ENST00000364208 315 ntBASIC11.1□□□□□ -0.63
TRBV12-3P01733 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
TRBV12-3P01733 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
TRBV12-3P01733 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
TRBV12-3P01733 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
TRBV12-3P01733 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
TRBV12-3P01733 ACTG1P2-201ENST00000415776 1125 ntBASIC11.1□□□□□ -0.63
TRBV12-3P01733 ACTG1P11-201ENST00000425411 1125 ntBASIC11.1□□□□□ -0.63
TRBV12-3P01733 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
TRBV12-3P01733 AC011742.3-201ENST00000439053 820 ntBASIC11.1□□□□□ -0.63
TRBV12-3P01733 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC11.1□□□□□ -0.63
TRBV12-3P01733 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC11.1□□□□□ -0.63
TRBV12-3P01733 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC11.1□□□□□ -0.63
TRBV12-3P01733 BX284668.4-201ENST00000453917 508 ntBASIC11.1□□□□□ -0.63
TRBV12-3P01733 AKR7A2P1-201ENST00000460134 915 ntBASIC11.1□□□□□ -0.63
TRBV12-3P01733 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC11.1□□□□□ -0.63
TRBV12-3P01733 ARTN-209ENST00000479128 471 ntTSL 3 BASIC11.1□□□□□ -0.63
TRBV12-3P01733 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC11.1□□□□□ -0.63
TRBV12-3P01733 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC11.1□□□□□ -0.63
TRBV12-3P01733 SCARNA20.5-201ENST00000516991 142 ntBASIC11.1□□□□□ -0.63
TRBV12-3P01733 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
TRBV12-3P01733 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC11.1□□□□□ -0.63
TRBV12-3P01733 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC11.1□□□□□ -0.63
TRBV12-3P01733 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC11.1□□□□□ -0.63
TRBV12-3P01733 PAM16-211ENST00000575848 518 ntTSL 3 BASIC11.1□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms