Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
NKX2-2O95096 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NKX2-2O95096 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NKX2-2O95096 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
NKX2-2O95096 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
NKX2-2O95096 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NKX2-2O95096 AC130686.1-201ENST00000622936 2466 ntBASIC13.21□□□□□ -0.29
NKX2-2O95096 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NKX2-2O95096 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NKX2-2O95096 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC13.21□□□□□ -0.29
NKX2-2O95096 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NKX2-2O95096 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NKX2-2O95096 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NKX2-2O95096 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NKX2-2O95096 STK26-204ENST00000481105 1835 ntTSL 2 BASIC13.21□□□□□ -0.29
NKX2-2O95096 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
NKX2-2O95096 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NKX2-2O95096 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NKX2-2O95096 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC13.21□□□□□ -0.29
NKX2-2O95096 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC13.21□□□□□ -0.29
NKX2-2O95096 AC011742.3-201ENST00000439053 820 ntBASIC13.21□□□□□ -0.29
NKX2-2O95096 OARD1-204ENST00000464633 717 ntTSL 2 BASIC13.21□□□□□ -0.29
NKX2-2O95096 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NKX2-2O95096 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC13.21□□□□□ -0.29
NKX2-2O95096 GOLGA2P8-201ENST00000505201 779 ntBASIC13.21□□□□□ -0.29
NKX2-2O95096 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC13.21□□□□□ -0.29
NKX2-2O95096 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC13.21□□□□□ -0.29
NKX2-2O95096 AC093752.3-201ENST00000567343 901 ntBASIC13.21□□□□□ -0.29
NKX2-2O95096 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
NKX2-2O95096 RN7SL219P-201ENST00000582872 296 ntBASIC13.21□□□□□ -0.29
NKX2-2O95096 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC13.21□□□□□ -0.29
NKX2-2O95096 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NKX2-2O95096 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC13.21□□□□□ -0.29
NKX2-2O95096 AL451050.2-201ENST00000606967 682 ntBASIC13.21□□□□□ -0.29
NKX2-2O95096 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC13.21□□□□□ -0.29
NKX2-2O95096 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NKX2-2O95096 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
NKX2-2O95096 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
NKX2-2O95096 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
NKX2-2O95096 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
NKX2-2O95096 AC072061.1-201ENST00000569710 2234 ntBASIC13.21□□□□□ -0.29
NKX2-2O95096 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NKX2-2O95096 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC13.21□□□□□ -0.3
NKX2-2O95096 RCC2P1-201ENST00000452257 1476 ntBASIC13.21□□□□□ -0.3
NKX2-2O95096 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
NKX2-2O95096 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NKX2-2O95096 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NKX2-2O95096 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NKX2-2O95096 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
NKX2-2O95096 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NKX2-2O95096 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NKX2-2O95096 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NKX2-2O95096 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NKX2-2O95096 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
NKX2-2O95096 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
NKX2-2O95096 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX2-2O95096 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC13.2□□□□□ -0.3
NKX2-2O95096 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX2-2O95096 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
NKX2-2O95096 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
NKX2-2O95096 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.2□□□□□ -0.3
NKX2-2O95096 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC13.2□□□□□ -0.3
NKX2-2O95096 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX2-2O95096 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX2-2O95096 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX2-2O95096 AMT-256ENST00000638063 1783 ntTSL 5 BASIC13.2□□□□□ -0.3
NKX2-2O95096 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.2□□□□□ -0.3
NKX2-2O95096 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
NKX2-2O95096 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX2-2O95096 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX2-2O95096 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX2-2O95096 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
NKX2-2O95096 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX2-2O95096 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NKX2-2O95096 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX2-2O95096 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX2-2O95096 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.2□□□□□ -0.3
NKX2-2O95096 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
NKX2-2O95096 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX2-2O95096 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX2-2O95096 RN7SKP214-201ENST00000364208 315 ntBASIC13.2□□□□□ -0.3
NKX2-2O95096 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX2-2O95096 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
NKX2-2O95096 AC006033.1-201ENST00000440505 426 ntBASIC13.2□□□□□ -0.3
NKX2-2O95096 EIF4HP1-201ENST00000453115 687 ntBASIC13.2□□□□□ -0.3
NKX2-2O95096 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC13.2□□□□□ -0.3
NKX2-2O95096 RHEB-207ENST00000496004 744 ntTSL 2 BASIC13.2□□□□□ -0.3
NKX2-2O95096 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.2□□□□□ -0.3
NKX2-2O95096 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC13.2□□□□□ -0.3
NKX2-2O95096 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC13.2□□□□□ -0.3
NKX2-2O95096 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NKX2-2O95096 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NKX2-2O95096 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
NKX2-2O95096 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
NKX2-2O95096 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC13.2□□□□□ -0.3
NKX2-2O95096 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC13.2□□□□□ -0.3
NKX2-2O95096 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC13.2□□□□□ -0.3
NKX2-2O95096 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
NKX2-2O95096 KRT8P21-201ENST00000430398 1491 ntBASIC13.2□□□□□ -0.3
NKX2-2O95096 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms