Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
O00370 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
O00370 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.05
O00370 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
O00370 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
O00370 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
O00370 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
O00370 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
O00370 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
O00370 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
O00370 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
O00370 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
O00370 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
O00370 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC15.33■□□□□ 0.04
O00370 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC15.33■□□□□ 0.04
O00370 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
O00370 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC15.33■□□□□ 0.04
O00370 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
O00370 MARK2P5-201ENST00000507649 634 ntBASIC15.33■□□□□ 0.04
O00370 PACS1-203ENST00000524815 628 ntTSL 4 BASIC15.33■□□□□ 0.04
O00370 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC15.33■□□□□ 0.04
O00370 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC15.33■□□□□ 0.04
O00370 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
O00370 AC243960.2-201ENST00000600996 747 ntBASIC15.33■□□□□ 0.04
O00370 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC15.33■□□□□ 0.04
O00370 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
O00370 AL136295.7-201ENST00000619226 1200 ntBASIC15.33■□□□□ 0.04
O00370 AC090386.2-201ENST00000623010 1039 ntBASIC15.33■□□□□ 0.04
O00370 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC15.33■□□□□ 0.04
O00370 AC092299.1-201ENST00000632679 757 ntBASIC15.33■□□□□ 0.04
O00370 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.33■□□□□ 0.04
O00370 TUBB8P4-201ENST00000511806 1324 ntBASIC15.33■□□□□ 0.04
O00370 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
O00370 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
O00370 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
O00370 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
O00370 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
O00370 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
O00370 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
O00370 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
O00370 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC15.32■□□□□ 0.04
O00370 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
O00370 AC126335.2-201ENST00000623362 4637 ntBASIC15.32■□□□□ 0.04
O00370 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
O00370 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
O00370 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
O00370 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
O00370 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
O00370 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
O00370 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC15.32■□□□□ 0.04
O00370 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
O00370 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
O00370 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
O00370 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC15.32■□□□□ 0.04
O00370 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC15.32■□□□□ 0.04
O00370 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
O00370 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
O00370 PPT1-213ENST00000641319 2388 ntBASIC15.32■□□□□ 0.04
O00370 MAPT-IT1-201ENST00000624111 3016 ntBASIC15.32■□□□□ 0.04
O00370 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
O00370 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC15.32■□□□□ 0.04
O00370 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
O00370 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
O00370 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC15.32■□□□□ 0.04
O00370 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
O00370 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC15.32■□□□□ 0.04
O00370 AC091804.1-201ENST00000486888 567 ntBASIC15.32■□□□□ 0.04
O00370 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC15.32■□□□□ 0.04
O00370 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC15.32■□□□□ 0.04
O00370 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
O00370 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC15.32■□□□□ 0.04
O00370 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC15.32■□□□□ 0.04
O00370 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
O00370 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
O00370 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
O00370 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
O00370 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
O00370 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
O00370 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
O00370 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
O00370 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC15.32■□□□□ 0.04
O00370 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC15.32■□□□□ 0.04
O00370 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC15.32■□□□□ 0.04
O00370 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
O00370 AL157996.1-201ENST00000624684 2299 ntBASIC15.32■□□□□ 0.04
O00370 TCAM1P-207ENST00000485295 1537 ntBASIC15.32■□□□□ 0.04
O00370 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
O00370 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC15.32■□□□□ 0.04
O00370 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
O00370 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC15.31■□□□□ 0.04
O00370 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC15.31■□□□□ 0.04
O00370 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
O00370 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC15.31■□□□□ 0.04
O00370 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
O00370 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
O00370 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
O00370 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC15.31■□□□□ 0.04
O00370 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
O00370 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
O00370 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms