Protein–RNA interactions for Protein: Q9H6F2

TMEM38A, Trimeric intracellular cation channel type A, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38AQ9H6F2 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM38AQ9H6F2 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM38AQ9H6F2 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.38□□□□□ -0.27
TMEM38AQ9H6F2 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TMEM38AQ9H6F2 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM38AQ9H6F2 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM38AQ9H6F2 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM38AQ9H6F2 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM38AQ9H6F2 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC13.37□□□□□ -0.27
TMEM38AQ9H6F2 RCC2P1-201ENST00000452257 1476 ntBASIC13.37□□□□□ -0.27
TMEM38AQ9H6F2 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM38AQ9H6F2 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC13.37□□□□□ -0.27
TMEM38AQ9H6F2 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC13.37□□□□□ -0.27
TMEM38AQ9H6F2 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.37□□□□□ -0.27
TMEM38AQ9H6F2 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC13.37□□□□□ -0.27
TMEM38AQ9H6F2 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM38AQ9H6F2 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM38AQ9H6F2 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC13.37□□□□□ -0.27
TMEM38AQ9H6F2 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM38AQ9H6F2 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
TMEM38AQ9H6F2 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM38AQ9H6F2 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
TMEM38AQ9H6F2 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM38AQ9H6F2 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.37□□□□□ -0.27
TMEM38AQ9H6F2 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
TMEM38AQ9H6F2 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM38AQ9H6F2 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM38AQ9H6F2 TMEM14DP-201ENST00000422205 345 ntBASIC13.37□□□□□ -0.27
TMEM38AQ9H6F2 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.37□□□□□ -0.27
TMEM38AQ9H6F2 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.37□□□□□ -0.27
TMEM38AQ9H6F2 FAM58BP-201ENST00000439056 645 ntBASIC13.37□□□□□ -0.27
TMEM38AQ9H6F2 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.37□□□□□ -0.27
TMEM38AQ9H6F2 HOMER2P2-201ENST00000451621 847 ntBASIC13.37□□□□□ -0.27
TMEM38AQ9H6F2 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM38AQ9H6F2 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM38AQ9H6F2 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TMEM38AQ9H6F2 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC13.37□□□□□ -0.27
TMEM38AQ9H6F2 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.37□□□□□ -0.27
TMEM38AQ9H6F2 GREM1-201ENST00000560677 623 ntTSL 4 BASIC13.37□□□□□ -0.27
TMEM38AQ9H6F2 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM38AQ9H6F2 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
TMEM38AQ9H6F2 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM38AQ9H6F2 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM38AQ9H6F2 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
TMEM38AQ9H6F2 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM38AQ9H6F2 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM38AQ9H6F2 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM38AQ9H6F2 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM38AQ9H6F2 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM38AQ9H6F2 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM38AQ9H6F2 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM38AQ9H6F2 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM38AQ9H6F2 AL590824.1-201ENST00000403828 1349 ntBASIC13.37□□□□□ -0.27
TMEM38AQ9H6F2 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM38AQ9H6F2 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM38AQ9H6F2 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TMEM38AQ9H6F2 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
TMEM38AQ9H6F2 DDC-214ENST00000622873 1839 ntTSL 3 BASIC13.36□□□□□ -0.27
TMEM38AQ9H6F2 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM38AQ9H6F2 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM38AQ9H6F2 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC13.36□□□□□ -0.27
TMEM38AQ9H6F2 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
TMEM38AQ9H6F2 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM38AQ9H6F2 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
TMEM38AQ9H6F2 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM38AQ9H6F2 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM38AQ9H6F2 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM38AQ9H6F2 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC13.36□□□□□ -0.27
TMEM38AQ9H6F2 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM38AQ9H6F2 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
TMEM38AQ9H6F2 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
TMEM38AQ9H6F2 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM38AQ9H6F2 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM38AQ9H6F2 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
TMEM38AQ9H6F2 AC136604.1-202ENST00000425471 771 ntBASIC13.36□□□□□ -0.27
TMEM38AQ9H6F2 KRT43P-201ENST00000434019 910 ntBASIC13.36□□□□□ -0.27
TMEM38AQ9H6F2 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.36□□□□□ -0.27
TMEM38AQ9H6F2 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM38AQ9H6F2 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.36□□□□□ -0.27
TMEM38AQ9H6F2 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.36□□□□□ -0.27
TMEM38AQ9H6F2 AP000812.2-201ENST00000538934 718 ntBASIC13.36□□□□□ -0.27
TMEM38AQ9H6F2 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.36□□□□□ -0.27
TMEM38AQ9H6F2 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.36□□□□□ -0.27
TMEM38AQ9H6F2 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.36□□□□□ -0.27
TMEM38AQ9H6F2 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.36□□□□□ -0.27
TMEM38AQ9H6F2 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.36□□□□□ -0.27
TMEM38AQ9H6F2 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
TMEM38AQ9H6F2 AL591471.1-201ENST00000621855 229 ntBASIC13.36□□□□□ -0.27
TMEM38AQ9H6F2 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC13.36□□□□□ -0.27
TMEM38AQ9H6F2 Z98259.2-201ENST00000641583 609 ntBASIC13.36□□□□□ -0.27
TMEM38AQ9H6F2 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM38AQ9H6F2 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.36□□□□□ -0.27
TMEM38AQ9H6F2 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM38AQ9H6F2 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM38AQ9H6F2 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM38AQ9H6F2 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM38AQ9H6F2 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM38AQ9H6F2 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM38AQ9H6F2 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TMEM38AQ9H6F2 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms