Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
USB1Q9BQ65 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.12□□□□□ -0.31
USB1Q9BQ65 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
USB1Q9BQ65 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
USB1Q9BQ65 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
USB1Q9BQ65 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
USB1Q9BQ65 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.12□□□□□ -0.31
USB1Q9BQ65 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
USB1Q9BQ65 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
USB1Q9BQ65 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
USB1Q9BQ65 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.12□□□□□ -0.31
USB1Q9BQ65 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
USB1Q9BQ65 HSPA7-201ENST00000445535 1927 ntBASIC13.11□□□□□ -0.31
USB1Q9BQ65 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
USB1Q9BQ65 MBLAC2-202ENST00000514906 1936 ntBASIC13.11□□□□□ -0.31
USB1Q9BQ65 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
USB1Q9BQ65 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC13.11□□□□□ -0.31
USB1Q9BQ65 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC13.11□□□□□ -0.31
USB1Q9BQ65 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
USB1Q9BQ65 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
USB1Q9BQ65 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.11□□□□□ -0.31
USB1Q9BQ65 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
USB1Q9BQ65 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
USB1Q9BQ65 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
USB1Q9BQ65 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
USB1Q9BQ65 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
USB1Q9BQ65 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
USB1Q9BQ65 SNORA40.4-201ENST00000390971 128 ntBASIC13.11□□□□□ -0.31
USB1Q9BQ65 MIR663B-201ENST00000408361 115 ntBASIC13.11□□□□□ -0.31
USB1Q9BQ65 AL008707.1-201ENST00000422498 534 ntBASIC13.11□□□□□ -0.31
USB1Q9BQ65 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.11□□□□□ -0.31
USB1Q9BQ65 TRIM60P13-201ENST00000432350 1283 ntBASIC13.11□□□□□ -0.31
USB1Q9BQ65 AC007969.1-201ENST00000433675 447 ntBASIC13.11□□□□□ -0.31
USB1Q9BQ65 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC13.11□□□□□ -0.31
USB1Q9BQ65 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
USB1Q9BQ65 ARTN-209ENST00000479128 471 ntTSL 3 BASIC13.11□□□□□ -0.31
USB1Q9BQ65 RPSAP36-202ENST00000494591 1261 ntBASIC13.11□□□□□ -0.31
USB1Q9BQ65 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
USB1Q9BQ65 AL391280.1-201ENST00000506969 1062 ntBASIC13.11□□□□□ -0.31
USB1Q9BQ65 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC13.11□□□□□ -0.31
USB1Q9BQ65 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
USB1Q9BQ65 AC243972.2-201ENST00000541653 991 ntBASIC13.11□□□□□ -0.31
USB1Q9BQ65 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.11□□□□□ -0.31
USB1Q9BQ65 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.11□□□□□ -0.31
USB1Q9BQ65 MIR4741-201ENST00000579822 90 ntBASIC13.11□□□□□ -0.31
USB1Q9BQ65 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC13.11□□□□□ -0.31
USB1Q9BQ65 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.11□□□□□ -0.31
USB1Q9BQ65 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
USB1Q9BQ65 AC073413.1-201ENST00000603927 732 ntBASIC13.11□□□□□ -0.31
USB1Q9BQ65 AC138696.2-201ENST00000607376 223 ntBASIC13.11□□□□□ -0.31
USB1Q9BQ65 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC13.11□□□□□ -0.31
USB1Q9BQ65 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.11□□□□□ -0.31
USB1Q9BQ65 AL669831.3-208ENST00000634337 891 ntTSL 5 BASIC13.11□□□□□ -0.31
USB1Q9BQ65 AC244452.3-201ENST00000636814 210 ntBASIC13.11□□□□□ -0.31
USB1Q9BQ65 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
USB1Q9BQ65 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
USB1Q9BQ65 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
USB1Q9BQ65 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
USB1Q9BQ65 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
USB1Q9BQ65 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
USB1Q9BQ65 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
USB1Q9BQ65 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
USB1Q9BQ65 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
USB1Q9BQ65 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.11□□□□□ -0.31
USB1Q9BQ65 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
USB1Q9BQ65 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
USB1Q9BQ65 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.11□□□□□ -0.31
USB1Q9BQ65 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
USB1Q9BQ65 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
USB1Q9BQ65 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
USB1Q9BQ65 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
USB1Q9BQ65 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.11□□□□□ -0.31
USB1Q9BQ65 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
USB1Q9BQ65 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
USB1Q9BQ65 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
USB1Q9BQ65 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC13.1□□□□□ -0.31
USB1Q9BQ65 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
USB1Q9BQ65 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
USB1Q9BQ65 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
USB1Q9BQ65 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
USB1Q9BQ65 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
USB1Q9BQ65 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
USB1Q9BQ65 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.1□□□□□ -0.31
USB1Q9BQ65 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
USB1Q9BQ65 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.1□□□□□ -0.31
USB1Q9BQ65 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
USB1Q9BQ65 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.1□□□□□ -0.31
USB1Q9BQ65 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.1□□□□□ -0.31
USB1Q9BQ65 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
USB1Q9BQ65 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
USB1Q9BQ65 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.1□□□□□ -0.31
USB1Q9BQ65 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
USB1Q9BQ65 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
USB1Q9BQ65 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
USB1Q9BQ65 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
USB1Q9BQ65 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.1□□□□□ -0.31
USB1Q9BQ65 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
USB1Q9BQ65 MTCYBP15-201ENST00000433123 1127 ntBASIC13.1□□□□□ -0.31
USB1Q9BQ65 AL162253.1-201ENST00000443792 758 ntTSL 3 BASIC13.1□□□□□ -0.31
USB1Q9BQ65 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms