Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF135Q8IUD6 RPSAP15-201ENST00000448168 861 ntBASIC15.3■□□□□ 0.04
RNF135Q8IUD6 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
RNF135Q8IUD6 LINC00634-202ENST00000505157 222 ntBASIC15.3■□□□□ 0.04
RNF135Q8IUD6 MRPL22P1-201ENST00000505398 616 ntBASIC15.3■□□□□ 0.04
RNF135Q8IUD6 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF135Q8IUD6 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
RNF135Q8IUD6 CR383656.3-201ENST00000551315 183 ntBASIC15.3■□□□□ 0.04
RNF135Q8IUD6 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF135Q8IUD6 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.3■□□□□ 0.04
RNF135Q8IUD6 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC15.3■□□□□ 0.04
RNF135Q8IUD6 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RNF135Q8IUD6 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
RNF135Q8IUD6 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF135Q8IUD6 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC15.3■□□□□ 0.04
RNF135Q8IUD6 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF135Q8IUD6 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF135Q8IUD6 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF135Q8IUD6 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF135Q8IUD6 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF135Q8IUD6 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
RNF135Q8IUD6 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF135Q8IUD6 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.29■□□□□ 0.04
RNF135Q8IUD6 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF135Q8IUD6 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF135Q8IUD6 LINC01165-201ENST00000445190 1623 ntBASIC15.29■□□□□ 0.04
RNF135Q8IUD6 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF135Q8IUD6 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF135Q8IUD6 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF135Q8IUD6 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
RNF135Q8IUD6 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF135Q8IUD6 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF135Q8IUD6 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF135Q8IUD6 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC15.29■□□□□ 0.04
RNF135Q8IUD6 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF135Q8IUD6 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF135Q8IUD6 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF135Q8IUD6 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
RNF135Q8IUD6 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF135Q8IUD6 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.29■□□□□ 0.04
RNF135Q8IUD6 GCSHP3-201ENST00000431120 391 ntBASIC15.29■□□□□ 0.04
RNF135Q8IUD6 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF135Q8IUD6 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF135Q8IUD6 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF135Q8IUD6 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC15.29■□□□□ 0.04
RNF135Q8IUD6 AC009560.1-201ENST00000620208 434 ntBASIC15.29■□□□□ 0.04
RNF135Q8IUD6 AC002472.4-201ENST00000641915 272 ntBASIC15.29■□□□□ 0.04
RNF135Q8IUD6 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF135Q8IUD6 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RNF135Q8IUD6 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF135Q8IUD6 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RNF135Q8IUD6 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF135Q8IUD6 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RNF135Q8IUD6 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF135Q8IUD6 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF135Q8IUD6 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF135Q8IUD6 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RNF135Q8IUD6 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF135Q8IUD6 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF135Q8IUD6 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF135Q8IUD6 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF135Q8IUD6 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF135Q8IUD6 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RNF135Q8IUD6 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF135Q8IUD6 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF135Q8IUD6 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
RNF135Q8IUD6 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.28■□□□□ 0.04
RNF135Q8IUD6 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF135Q8IUD6 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF135Q8IUD6 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF135Q8IUD6 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF135Q8IUD6 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.28■□□□□ 0.04
RNF135Q8IUD6 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF135Q8IUD6 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF135Q8IUD6 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF135Q8IUD6 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF135Q8IUD6 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF135Q8IUD6 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
RNF135Q8IUD6 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF135Q8IUD6 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF135Q8IUD6 AC232323.1-201ENST00000540724 2099 ntBASIC15.28■□□□□ 0.04
RNF135Q8IUD6 CICP14-201ENST00000629111 2732 ntBASIC15.28■□□□□ 0.04
RNF135Q8IUD6 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF135Q8IUD6 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
RNF135Q8IUD6 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC15.28■□□□□ 0.04
RNF135Q8IUD6 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF135Q8IUD6 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.28■□□□□ 0.04
RNF135Q8IUD6 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RNF135Q8IUD6 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF135Q8IUD6 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF135Q8IUD6 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
RNF135Q8IUD6 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF135Q8IUD6 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF135Q8IUD6 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC15.28■□□□□ 0.04
RNF135Q8IUD6 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF135Q8IUD6 ACTBP7-201ENST00000418351 1124 ntBASIC15.28■□□□□ 0.04
RNF135Q8IUD6 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC15.28■□□□□ 0.04
RNF135Q8IUD6 KRT17P4-201ENST00000429445 819 ntBASIC15.28■□□□□ 0.04
RNF135Q8IUD6 FTH1P22-201ENST00000456305 520 ntBASIC15.28■□□□□ 0.04
RNF135Q8IUD6 ORAOV1P1-201ENST00000503108 395 ntBASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms