Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 RBP4-203ENST00000371469 814 ntTSL 5 BASIC11.54□□□□□ -0.56
VPS13CQ709C8 PLA2G2A-201ENST00000375111 970 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13CQ709C8 AL357833.1-201ENST00000413993 832 ntTSL 3 BASIC11.54□□□□□ -0.56
VPS13CQ709C8 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC11.54□□□□□ -0.56
VPS13CQ709C8 B9D1-206ENST00000461069 923 ntTSL 2 BASIC11.54□□□□□ -0.56
VPS13CQ709C8 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
VPS13CQ709C8 MARK2P17-201ENST00000498560 841 ntBASIC11.54□□□□□ -0.56
VPS13CQ709C8 AC011431.1-201ENST00000512971 230 ntBASIC11.54□□□□□ -0.56
VPS13CQ709C8 AC024405.2-201ENST00000528459 810 ntTSL 5 BASIC11.54□□□□□ -0.56
VPS13CQ709C8 DERL2-206ENST00000572834 589 ntTSL 3 BASIC11.54□□□□□ -0.56
VPS13CQ709C8 Metazoa_SRP.147-201ENST00000576563 312 ntBASIC11.54□□□□□ -0.56
VPS13CQ709C8 RPS5-205ENST00000598495 800 ntTSL 3 BASIC11.54□□□□□ -0.56
VPS13CQ709C8 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
VPS13CQ709C8 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC11.54□□□□□ -0.56
VPS13CQ709C8 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13CQ709C8 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
VPS13CQ709C8 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13CQ709C8 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13CQ709C8 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13CQ709C8 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
VPS13CQ709C8 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13CQ709C8 TNRC18P2-201ENST00000417666 2714 ntBASIC11.54□□□□□ -0.56
VPS13CQ709C8 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13CQ709C8 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
VPS13CQ709C8 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13CQ709C8 MPV17-209ENST00000405983 859 ntTSL 5 BASIC11.54□□□□□ -0.56
VPS13CQ709C8 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC11.54□□□□□ -0.56
VPS13CQ709C8 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC11.54□□□□□ -0.56
VPS13CQ709C8 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13CQ709C8 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13CQ709C8 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC11.54□□□□□ -0.56
VPS13CQ709C8 ZFYVE1-206ENST00000555072 1225 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13CQ709C8 CCND3P2-201ENST00000579393 537 ntBASIC11.54□□□□□ -0.56
VPS13CQ709C8 ACTBP9-201ENST00000587663 1099 ntBASIC11.54□□□□□ -0.56
VPS13CQ709C8 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC11.54□□□□□ -0.56
VPS13CQ709C8 CSH2-207ENST00000613718 666 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13CQ709C8 SRP19-208ENST00000621420 1270 ntTSL 3 BASIC11.54□□□□□ -0.56
VPS13CQ709C8 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC11.54□□□□□ -0.56
VPS13CQ709C8 AC104581.4-201ENST00000623126 3052 ntBASIC11.54□□□□□ -0.56
VPS13CQ709C8 AL596257.1-201ENST00000641463 2694 ntBASIC11.54□□□□□ -0.56
VPS13CQ709C8 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13CQ709C8 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13CQ709C8 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13CQ709C8 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13CQ709C8 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC11.54□□□□□ -0.56
VPS13CQ709C8 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13CQ709C8 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC11.54□□□□□ -0.56
VPS13CQ709C8 ABCD1P4-201ENST00000399687 604 ntBASIC11.54□□□□□ -0.56
VPS13CQ709C8 AL954722.1-201ENST00000431238 259 ntBASIC11.54□□□□□ -0.56
VPS13CQ709C8 C3orf84-201ENST00000432035 669 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
VPS13CQ709C8 TBC1D3P6-201ENST00000505954 962 ntBASIC11.54□□□□□ -0.56
VPS13CQ709C8 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC11.54□□□□□ -0.56
VPS13CQ709C8 AC002996.1-201ENST00000546840 784 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
VPS13CQ709C8 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
VPS13CQ709C8 CCDC32-215ENST00000625629 801 ntTSL 5 BASIC11.54□□□□□ -0.56
VPS13CQ709C8 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13CQ709C8 AC089987.1-201ENST00000551654 2209 ntBASIC11.54□□□□□ -0.56
VPS13CQ709C8 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13CQ709C8 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13CQ709C8 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13CQ709C8 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC11.54□□□□□ -0.56
VPS13CQ709C8 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13CQ709C8 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC11.54□□□□□ -0.56
VPS13CQ709C8 AL031590.1-202ENST00000641466 1737 ntBASIC11.54□□□□□ -0.56
VPS13CQ709C8 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC11.54□□□□□ -0.56
VPS13CQ709C8 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
VPS13CQ709C8 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
VPS13CQ709C8 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
VPS13CQ709C8 AC090696.1-201ENST00000419100 418 ntTSL 3 BASIC11.53□□□□□ -0.56
VPS13CQ709C8 CRIP1P2-201ENST00000425396 228 ntBASIC11.53□□□□□ -0.56
VPS13CQ709C8 SMIM28-201ENST00000573100 855 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
VPS13CQ709C8 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC11.53□□□□□ -0.56
VPS13CQ709C8 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
VPS13CQ709C8 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
VPS13CQ709C8 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
VPS13CQ709C8 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
VPS13CQ709C8 TGM3-201ENST00000381458 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
VPS13CQ709C8 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
VPS13CQ709C8 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
VPS13CQ709C8 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
VPS13CQ709C8 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC11.53□□□□□ -0.56
VPS13CQ709C8 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
VPS13CQ709C8 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
VPS13CQ709C8 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
VPS13CQ709C8 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC11.53□□□□□ -0.56
VPS13CQ709C8 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
VPS13CQ709C8 AC091729.3-203ENST00000413706 674 ntTSL 5 BASIC11.53□□□□□ -0.56
VPS13CQ709C8 AL359092.2-201ENST00000423330 585 ntBASIC11.53□□□□□ -0.56
VPS13CQ709C8 HMGA1P2-201ENST00000430198 324 ntBASIC11.53□□□□□ -0.56
VPS13CQ709C8 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
VPS13CQ709C8 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC11.53□□□□□ -0.56
VPS13CQ709C8 EFNA5-204ENST00000509503 637 ntTSL 5 BASIC11.53□□□□□ -0.56
VPS13CQ709C8 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC11.53□□□□□ -0.56
VPS13CQ709C8 AP000920.1-201ENST00000531824 344 ntBASIC11.53□□□□□ -0.56
VPS13CQ709C8 URB1-AS1-201ENST00000534991 831 ntBASIC11.53□□□□□ -0.56
VPS13CQ709C8 AL513165.2-203ENST00000537239 717 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
VPS13CQ709C8 BOLA3P2-201ENST00000586496 323 ntBASIC11.53□□□□□ -0.56
VPS13CQ709C8 PRR20FP-201ENST00000603320 180 ntBASIC11.53□□□□□ -0.56
VPS13CQ709C8 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
VPS13CQ709C8 CREB5-202ENST00000396298 2001 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms