Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SHROOM1Q2M3G4 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC16.58■□□□□ 0.24
SHROOM1Q2M3G4 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC16.58■□□□□ 0.24
SHROOM1Q2M3G4 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC16.58■□□□□ 0.24
SHROOM1Q2M3G4 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SHROOM1Q2M3G4 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.58■□□□□ 0.24
SHROOM1Q2M3G4 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC16.58■□□□□ 0.24
SHROOM1Q2M3G4 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SHROOM1Q2M3G4 ODCP-201ENST00000459650 1639 ntBASIC16.58■□□□□ 0.24
SHROOM1Q2M3G4 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
SHROOM1Q2M3G4 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SHROOM1Q2M3G4 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC16.58■□□□□ 0.24
SHROOM1Q2M3G4 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SHROOM1Q2M3G4 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC16.58■□□□□ 0.24
SHROOM1Q2M3G4 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SHROOM1Q2M3G4 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SHROOM1Q2M3G4 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SHROOM1Q2M3G4 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
SHROOM1Q2M3G4 AC068418.2-201ENST00000577309 3703 ntBASIC16.57■□□□□ 0.24
SHROOM1Q2M3G4 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SHROOM1Q2M3G4 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SHROOM1Q2M3G4 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SHROOM1Q2M3G4 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC16.57■□□□□ 0.24
SHROOM1Q2M3G4 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SHROOM1Q2M3G4 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC16.57■□□□□ 0.24
SHROOM1Q2M3G4 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHROOM1Q2M3G4 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHROOM1Q2M3G4 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SHROOM1Q2M3G4 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHROOM1Q2M3G4 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHROOM1Q2M3G4 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
SHROOM1Q2M3G4 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHROOM1Q2M3G4 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC16.57■□□□□ 0.24
SHROOM1Q2M3G4 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC16.57■□□□□ 0.24
SHROOM1Q2M3G4 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC16.57■□□□□ 0.24
SHROOM1Q2M3G4 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC16.57■□□□□ 0.24
SHROOM1Q2M3G4 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC16.57■□□□□ 0.24
SHROOM1Q2M3G4 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SHROOM1Q2M3G4 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC16.57■□□□□ 0.24
SHROOM1Q2M3G4 SLC25A15P3-201ENST00000505530 290 ntBASIC16.57■□□□□ 0.24
SHROOM1Q2M3G4 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC16.57■□□□□ 0.24
SHROOM1Q2M3G4 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC16.57■□□□□ 0.24
SHROOM1Q2M3G4 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC16.57■□□□□ 0.24
SHROOM1Q2M3G4 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
SHROOM1Q2M3G4 AC226150.1-201ENST00000544259 466 ntBASIC16.57■□□□□ 0.24
SHROOM1Q2M3G4 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC16.57■□□□□ 0.24
SHROOM1Q2M3G4 AC145285.5-201ENST00000562217 361 ntBASIC16.57■□□□□ 0.24
SHROOM1Q2M3G4 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC16.57■□□□□ 0.24
SHROOM1Q2M3G4 AC138466.5-201ENST00000624002 808 ntBASIC16.57■□□□□ 0.24
SHROOM1Q2M3G4 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC16.57■□□□□ 0.24
SHROOM1Q2M3G4 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHROOM1Q2M3G4 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SHROOM1Q2M3G4 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHROOM1Q2M3G4 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHROOM1Q2M3G4 AC015909.5-201ENST00000624336 2266 ntBASIC16.57■□□□□ 0.24
SHROOM1Q2M3G4 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHROOM1Q2M3G4 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHROOM1Q2M3G4 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC16.57■□□□□ 0.24
SHROOM1Q2M3G4 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SHROOM1Q2M3G4 AL390755.1-201ENST00000623716 2027 ntBASIC16.57■□□□□ 0.24
SHROOM1Q2M3G4 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SHROOM1Q2M3G4 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHROOM1Q2M3G4 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SHROOM1Q2M3G4 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SHROOM1Q2M3G4 AMT-256ENST00000638063 1783 ntTSL 5 BASIC16.56■□□□□ 0.24
SHROOM1Q2M3G4 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC16.56■□□□□ 0.24
SHROOM1Q2M3G4 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHROOM1Q2M3G4 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHROOM1Q2M3G4 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.56■□□□□ 0.24
SHROOM1Q2M3G4 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHROOM1Q2M3G4 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
SHROOM1Q2M3G4 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
SHROOM1Q2M3G4 AC021305.1-201ENST00000520656 1514 ntBASIC16.56■□□□□ 0.24
SHROOM1Q2M3G4 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.56■□□□□ 0.24
SHROOM1Q2M3G4 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.56■□□□□ 0.24
SHROOM1Q2M3G4 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
SHROOM1Q2M3G4 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHROOM1Q2M3G4 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC16.56■□□□□ 0.24
SHROOM1Q2M3G4 AC015802.1-201ENST00000588104 1449 ntBASIC16.56■□□□□ 0.24
SHROOM1Q2M3G4 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SHROOM1Q2M3G4 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHROOM1Q2M3G4 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHROOM1Q2M3G4 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC16.56■□□□□ 0.24
SHROOM1Q2M3G4 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC16.56■□□□□ 0.24
SHROOM1Q2M3G4 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHROOM1Q2M3G4 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
SHROOM1Q2M3G4 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC16.56■□□□□ 0.24
SHROOM1Q2M3G4 GAS7-216ENST00000583882 553 ntTSL 5 BASIC16.56■□□□□ 0.24
SHROOM1Q2M3G4 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC16.56■□□□□ 0.24
SHROOM1Q2M3G4 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC16.56■□□□□ 0.24
SHROOM1Q2M3G4 AL451007.2-201ENST00000632004 563 ntBASIC16.56■□□□□ 0.24
SHROOM1Q2M3G4 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SHROOM1Q2M3G4 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SHROOM1Q2M3G4 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHROOM1Q2M3G4 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHROOM1Q2M3G4 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHROOM1Q2M3G4 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SHROOM1Q2M3G4 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
SHROOM1Q2M3G4 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHROOM1Q2M3G4 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms