Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 UCN3-201ENST00000380433 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 AC026884.1-201ENST00000418296 457 ntBASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 KRT18P62-201ENST00000446618 1287 ntBASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 SPRY4-AS1-206ENST00000515288 539 ntTSL 2 BASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 AL132994.1-201ENST00000554098 400 ntBASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 ABCC6P1-203ENST00000565566 1170 ntBASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 RN7SL480P-201ENST00000581481 294 ntBASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 AL589935.2-201ENST00000616471 1231 ntBASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RSPO4Q2I0M5 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
RSPO4Q2I0M5 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.77□□□□□ -0.2
RSPO4Q2I0M5 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.2
RSPO4Q2I0M5 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
RSPO4Q2I0M5 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RSPO4Q2I0M5 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RSPO4Q2I0M5 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
RSPO4Q2I0M5 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
RSPO4Q2I0M5 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RSPO4Q2I0M5 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
RSPO4Q2I0M5 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RSPO4Q2I0M5 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
RSPO4Q2I0M5 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RSPO4Q2I0M5 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RSPO4Q2I0M5 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
RSPO4Q2I0M5 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RSPO4Q2I0M5 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RSPO4Q2I0M5 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RSPO4Q2I0M5 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RSPO4Q2I0M5 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC13.77□□□□□ -0.21
RSPO4Q2I0M5 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RSPO4Q2I0M5 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RSPO4Q2I0M5 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RSPO4Q2I0M5 FTH1P18-201ENST00000412071 549 ntBASIC13.77□□□□□ -0.21
RSPO4Q2I0M5 AC006987.1-201ENST00000413610 527 ntBASIC13.77□□□□□ -0.21
RSPO4Q2I0M5 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RSPO4Q2I0M5 FDPSP7-201ENST00000429043 1054 ntBASIC13.77□□□□□ -0.21
RSPO4Q2I0M5 AP000533.1-201ENST00000456143 1177 ntBASIC13.77□□□□□ -0.21
RSPO4Q2I0M5 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RSPO4Q2I0M5 RN7SL788P-201ENST00000460504 316 ntBASIC13.77□□□□□ -0.21
RSPO4Q2I0M5 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RSPO4Q2I0M5 PRSS3P1-201ENST00000503996 742 ntBASIC13.77□□□□□ -0.21
RSPO4Q2I0M5 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC13.77□□□□□ -0.21
RSPO4Q2I0M5 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC13.77□□□□□ -0.21
RSPO4Q2I0M5 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RSPO4Q2I0M5 STAU2-212ENST00000521419 972 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RSPO4Q2I0M5 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC13.77□□□□□ -0.21
RSPO4Q2I0M5 AC140658.4-201ENST00000561990 352 ntBASIC13.77□□□□□ -0.21
RSPO4Q2I0M5 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC13.77□□□□□ -0.21
RSPO4Q2I0M5 GACAT2-201ENST00000579368 818 ntTSL 2 BASIC13.77□□□□□ -0.21
RSPO4Q2I0M5 SKA2-205ENST00000580541 689 ntTSL 3 BASIC13.77□□□□□ -0.21
RSPO4Q2I0M5 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.77□□□□□ -0.21
RSPO4Q2I0M5 AC008555.6-201ENST00000605047 458 ntTSL 2 BASIC13.77□□□□□ -0.21
RSPO4Q2I0M5 AC015912.3-201ENST00000619432 348 ntBASIC13.77□□□□□ -0.21
RSPO4Q2I0M5 AC091769.1-201ENST00000619576 568 ntBASIC13.77□□□□□ -0.21
RSPO4Q2I0M5 AC020658.6-201ENST00000623564 1870 ntBASIC13.77□□□□□ -0.21
RSPO4Q2I0M5 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC13.77□□□□□ -0.21
RSPO4Q2I0M5 AL590556.2-202ENST00000636906 844 ntBASIC13.77□□□□□ -0.21
RSPO4Q2I0M5 LINC02228-204ENST00000642115 2962 ntBASIC13.77□□□□□ -0.21
RSPO4Q2I0M5 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.77□□□□□ -0.21
RSPO4Q2I0M5 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
RSPO4Q2I0M5 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RSPO4Q2I0M5 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms