Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 ZNF473-201ENST00000270617 4688 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
PCP4P48539 TSC22D2-201ENST00000361875 11154 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
PCP4P48539 KDM5D-201ENST00000317961 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
PCP4P48539 PCID2-206ENST00000375479 1671 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
PCP4P48539 DNAH10OS-201ENST00000514254 5040 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
PCP4P48539 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
PCP4P48539 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
PCP4P48539 MRS2-204ENST00000443868 3980 ntAPPRIS ALT2 TSL 2 BASIC9.26□□□□□ -0.93
PCP4P48539 AC010547.5-201ENST00000561908 3677 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
PCP4P48539 FAHD2A-201ENST00000233379 4757 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
PCP4P48539 ERBB2-218ENST00000584450 3730 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
PCP4P48539 NCBP2-201ENST00000321256 2169 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
PCP4P48539 HSD3B2-201ENST00000369416 1741 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
PCP4P48539 ZSCAN26-202ENST00000421553 2835 ntAPPRIS ALT1 TSL 1 (best) BASIC9.26□□□□□ -0.93
PCP4P48539 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
PCP4P48539 TRPC2-201ENST00000451043 3173 ntBASIC9.26□□□□□ -0.93
PCP4P48539 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
PCP4P48539 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
PCP4P48539 ENSA-205ENST00000361532 792 ntTSL 2 BASIC9.26□□□□□ -0.93
PCP4P48539 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC9.26□□□□□ -0.93
PCP4P48539 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC9.26□□□□□ -0.93
PCP4P48539 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
PCP4P48539 NOD1-201ENST00000222823 4499 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
PCP4P48539 RHOBTB2-205ENST00000519685 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
PCP4P48539 CD36-223ENST00000544133 1914 ntTSL 5 BASIC9.26□□□□□ -0.93
PCP4P48539 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC9.26□□□□□ -0.93
PCP4P48539 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
PCP4P48539 GPRASP2-201ENST00000332262 3720 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
PCP4P48539 HCN3-201ENST00000368358 3718 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
PCP4P48539 PPP1R17-201ENST00000342032 2268 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
PCP4P48539 ABCD1P2-201ENST00000429313 1601 ntBASIC9.26□□□□□ -0.93
PCP4P48539 SLC14A1-204ENST00000436407 2264 ntAPPRIS ALT2 TSL 2 BASIC9.26□□□□□ -0.93
PCP4P48539 HAP1-201ENST00000310778 4087 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
PCP4P48539 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
PCP4P48539 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
PCP4P48539 PAK3-204ENST00000372010 2606 ntAPPRIS ALT1 TSL 5 BASIC9.26□□□□□ -0.93
PCP4P48539 MCTP1-204ENST00000505078 2629 ntTSL 2 BASIC9.26□□□□□ -0.93
PCP4P48539 AL133216.2-201ENST00000622550 7213 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
PCP4P48539 AL137186.2-201ENST00000397264 3486 ntTSL 3 BASIC9.26□□□□□ -0.93
PCP4P48539 ATP5G3-201ENST00000284727 5484 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
PCP4P48539 TRMT61B-201ENST00000306108 1836 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
PCP4P48539 CFAP65-202ENST00000341552 5953 ntAPPRIS P4 TSL 5 BASIC9.26□□□□□ -0.93
PCP4P48539 IFT122-215ENST00000507564 3824 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
PCP4P48539 KCNH1-201ENST00000271751 8172 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
PCP4P48539 SNX29-205ENST00000566228 8171 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
PCP4P48539 ITGAL-202ENST00000358164 4673 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
PCP4P48539 YY1AP1-205ENST00000355499 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
PCP4P48539 SENP3-EIF4A1-201ENST00000614237 3519 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
PCP4P48539 NPY1R-201ENST00000296533 3029 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
PCP4P48539 BAZ2A-211ENST00000549884 6050 ntAPPRIS ALT2 TSL 2 BASIC9.26□□□□□ -0.93
PCP4P48539 TMEM94-202ENST00000375248 4703 ntTSL 2 BASIC9.26□□□□□ -0.93
PCP4P48539 GEMIN4-201ENST00000319004 3748 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
PCP4P48539 HOPX-205ENST00000420433 1543 ntTSL 5 BASIC9.26□□□□□ -0.93
PCP4P48539 PHB-210ENST00000511832 1509 ntTSL 2 BASIC9.26□□□□□ -0.93
PCP4P48539 AL137025.1-201ENST00000436932 2378 ntTSL 2 BASIC9.26□□□□□ -0.93
PCP4P48539 RTN3-206ENST00000377819 4937 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
PCP4P48539 ELP4-218ENST00000639570 5795 ntTSL 5 BASIC9.26□□□□□ -0.93
PCP4P48539 ZNF503-AS1-201ENST00000416398 1860 ntTSL 2 BASIC9.25□□□□□ -0.93
PCP4P48539 PSME3-205ENST00000545225 3082 ntTSL 2 BASIC9.25□□□□□ -0.93
PCP4P48539 ZNF568-202ENST00000415168 3774 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
PCP4P48539 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC9.25□□□□□ -0.93
PCP4P48539 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
PCP4P48539 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
PCP4P48539 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
PCP4P48539 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
PCP4P48539 DCTN1-202ENST00000394003 4479 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
PCP4P48539 LINC01138-210ENST00000640832 1709 ntTSL 5 BASIC9.25□□□□□ -0.93
PCP4P48539 MLX-203ENST00000435881 2428 ntAPPRIS ALT1 TSL 1 (best) BASIC9.25□□□□□ -0.93
PCP4P48539 LINC00242-201ENST00000437615 2418 ntTSL 2 BASIC9.25□□□□□ -0.93
PCP4P48539 ZBTB20-202ENST00000393785 3323 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
PCP4P48539 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC9.25□□□□□ -0.93
PCP4P48539 SYT6-210ENST00000641643 1587 ntBASIC9.25□□□□□ -0.93
PCP4P48539 ZBTB43-202ENST00000373464 5965 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
PCP4P48539 QARS-201ENST00000306125 2827 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
PCP4P48539 BCL2L13-213ENST00000538149 4797 ntTSL 2 BASIC9.25□□□□□ -0.93
PCP4P48539 CHEK1-213ENST00000532449 4051 ntTSL 2 BASIC9.25□□□□□ -0.93
PCP4P48539 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC9.25□□□□□ -0.93
PCP4P48539 CAB39L-201ENST00000347776 3361 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
PCP4P48539 PRNT-201ENST00000326539 2333 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
PCP4P48539 B3GALT5-204ENST00000398714 2341 ntTSL 5 BASIC9.25□□□□□ -0.93
PCP4P48539 ZNF419-206ENST00000426954 2319 ntAPPRIS ALT2 TSL 2 BASIC9.25□□□□□ -0.93
PCP4P48539 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
PCP4P48539 FLRT2-204ENST00000554746 3278 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
PCP4P48539 LINC01624-203ENST00000607074 3265 ntTSL 2 BASIC9.25□□□□□ -0.93
PCP4P48539 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
PCP4P48539 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
PCP4P48539 HAUS4P1-201ENST00000406739 1145 ntBASIC9.25□□□□□ -0.93
PCP4P48539 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC9.25□□□□□ -0.93
PCP4P48539 OR2I1P-207ENST00000453522 948 ntBASIC9.25□□□□□ -0.93
PCP4P48539 EHF-205ENST00000527935 557 ntTSL 2 BASIC9.25□□□□□ -0.93
PCP4P48539 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
PCP4P48539 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
PCP4P48539 NBPF12-201ENST00000439206 1831 ntTSL 5 BASIC9.25□□□□□ -0.93
PCP4P48539 POM121L1P-202ENST00000605258 1835 ntBASIC9.25□□□□□ -0.93
PCP4P48539 NBPF26-203ENST00000611702 1831 ntTSL 5 BASIC9.25□□□□□ -0.93
PCP4P48539 NBPF14-204ENST00000611826 1831 ntTSL 5 BASIC9.25□□□□□ -0.93
PCP4P48539 AC098614.1-202ENST00000634895 1830 ntBASIC9.25□□□□□ -0.93
PCP4P48539 CLDN1-201ENST00000295522 3481 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
PCP4P48539 MYO7A-211ENST00000620575 4016 ntTSL 5 BASIC9.25□□□□□ -0.93
PCP4P48539 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms