Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC14.11□□□□□ -0.15
TRIM23P36406 TPM1-223ENST00000560445 485 ntTSL 3 BASIC14.11□□□□□ -0.15
TRIM23P36406 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC14.11□□□□□ -0.15
TRIM23P36406 AC005632.3-201ENST00000605544 308 ntBASIC14.11□□□□□ -0.15
TRIM23P36406 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM23P36406 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM23P36406 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM23P36406 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TRIM23P36406 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM23P36406 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM23P36406 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRIM23P36406 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.11□□□□□ -0.15
TRIM23P36406 AL359183.1-201ENST00000623796 2132 ntBASIC14.11□□□□□ -0.15
TRIM23P36406 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.11□□□□□ -0.15
TRIM23P36406 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.11□□□□□ -0.15
TRIM23P36406 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM23P36406 AC012617.1-204ENST00000586340 2305 ntBASIC14.1□□□□□ -0.15
TRIM23P36406 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM23P36406 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.1□□□□□ -0.15
TRIM23P36406 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM23P36406 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TRIM23P36406 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TRIM23P36406 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.1□□□□□ -0.15
TRIM23P36406 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM23P36406 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM23P36406 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM23P36406 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TRIM23P36406 CR383656.2-201ENST00000548656 2254 ntBASIC14.1□□□□□ -0.15
TRIM23P36406 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TRIM23P36406 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM23P36406 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM23P36406 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM23P36406 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
TRIM23P36406 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC14.1□□□□□ -0.15
TRIM23P36406 ALG1L13P-202ENST00000519320 584 ntBASIC14.1□□□□□ -0.15
TRIM23P36406 CFL1-214ENST00000534769 758 ntTSL 2 BASIC14.1□□□□□ -0.15
TRIM23P36406 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC14.1□□□□□ -0.15
TRIM23P36406 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM23P36406 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC14.1□□□□□ -0.15
TRIM23P36406 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC14.1□□□□□ -0.15
TRIM23P36406 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC14.1□□□□□ -0.15
TRIM23P36406 CMC2-224ENST00000630396 481 ntTSL 5 BASIC14.1□□□□□ -0.15
TRIM23P36406 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM23P36406 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM23P36406 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM23P36406 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM23P36406 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TRIM23P36406 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM23P36406 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM23P36406 LINC00115-201ENST00000473798 1317 ntBASIC14.1□□□□□ -0.15
TRIM23P36406 AC006480.2-201ENST00000609770 1337 ntBASIC14.1□□□□□ -0.15
TRIM23P36406 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM23P36406 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM23P36406 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM23P36406 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM23P36406 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TRIM23P36406 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM23P36406 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TRIM23P36406 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRIM23P36406 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.09□□□□□ -0.15
TRIM23P36406 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC14.09□□□□□ -0.15
TRIM23P36406 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM23P36406 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM23P36406 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.09□□□□□ -0.15
TRIM23P36406 AC139749.1-202ENST00000617529 3139 ntBASIC14.09□□□□□ -0.15
TRIM23P36406 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TRIM23P36406 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM23P36406 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM23P36406 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.09□□□□□ -0.15
TRIM23P36406 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM23P36406 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM23P36406 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM23P36406 MIR33B-201ENST00000385104 96 ntBASIC14.09□□□□□ -0.15
TRIM23P36406 MIR645-201ENST00000385283 94 ntBASIC14.09□□□□□ -0.15
TRIM23P36406 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM23P36406 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC14.09□□□□□ -0.15
TRIM23P36406 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC14.09□□□□□ -0.15
TRIM23P36406 FGFR3P1-201ENST00000449999 601 ntBASIC14.09□□□□□ -0.15
TRIM23P36406 NOC2LP1-201ENST00000450578 752 ntBASIC14.09□□□□□ -0.15
TRIM23P36406 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC14.09□□□□□ -0.15
TRIM23P36406 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC14.09□□□□□ -0.15
TRIM23P36406 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC14.09□□□□□ -0.15
TRIM23P36406 LY6E-208ENST00000520531 490 ntTSL 2 BASIC14.09□□□□□ -0.15
TRIM23P36406 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC14.09□□□□□ -0.15
TRIM23P36406 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.09□□□□□ -0.15
TRIM23P36406 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC14.09□□□□□ -0.15
TRIM23P36406 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC14.09□□□□□ -0.15
TRIM23P36406 NDUFB10P1-201ENST00000567319 521 ntBASIC14.09□□□□□ -0.15
TRIM23P36406 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC14.09□□□□□ -0.15
TRIM23P36406 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC14.09□□□□□ -0.15
TRIM23P36406 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC14.09□□□□□ -0.15
TRIM23P36406 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TRIM23P36406 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM23P36406 AC020910.6-201ENST00000623084 1459 ntBASIC14.09□□□□□ -0.15
TRIM23P36406 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
TRIM23P36406 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM23P36406 BX640514.1-201ENST00000583223 1918 ntBASIC14.09□□□□□ -0.15
TRIM23P36406 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRIM23P36406 HLA-DQB1-202ENST00000399079 1501 ntBASIC14.09□□□□□ -0.15
TRIM23P36406 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms