Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT9P35527 AC114271.1-201ENST00000612689 2813 ntBASIC15.8■□□□□ 0.12
KRT9P35527 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
KRT9P35527 DMBT1P1-203ENST00000636837 4628 ntBASIC15.8■□□□□ 0.12
KRT9P35527 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.8■□□□□ 0.12
KRT9P35527 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC15.8■□□□□ 0.12
KRT9P35527 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
KRT9P35527 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
KRT9P35527 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
KRT9P35527 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
KRT9P35527 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT9P35527 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC15.79■□□□□ 0.12
KRT9P35527 AL354989.2-201ENST00000435838 1540 ntBASIC15.79■□□□□ 0.12
KRT9P35527 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
KRT9P35527 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT9P35527 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT9P35527 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.79■□□□□ 0.12
KRT9P35527 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC15.79■□□□□ 0.12
KRT9P35527 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
KRT9P35527 GOLGA8IP-202ENST00000611635 2100 ntBASIC15.79■□□□□ 0.12
KRT9P35527 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
KRT9P35527 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.79■□□□□ 0.12
KRT9P35527 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
KRT9P35527 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC15.79■□□□□ 0.12
KRT9P35527 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
KRT9P35527 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.79■□□□□ 0.12
KRT9P35527 CNN2P8-201ENST00000421872 913 ntBASIC15.79■□□□□ 0.12
KRT9P35527 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.79■□□□□ 0.12
KRT9P35527 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.79■□□□□ 0.12
KRT9P35527 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.79■□□□□ 0.12
KRT9P35527 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.79■□□□□ 0.12
KRT9P35527 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.79■□□□□ 0.12
KRT9P35527 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.79■□□□□ 0.12
KRT9P35527 AC138951.2-201ENST00000623455 1161 ntBASIC15.79■□□□□ 0.12
KRT9P35527 AC006453.4-201ENST00000636949 1252 ntBASIC15.79■□□□□ 0.12
KRT9P35527 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
KRT9P35527 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT9P35527 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
KRT9P35527 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT9P35527 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT9P35527 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT9P35527 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT9P35527 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
KRT9P35527 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT9P35527 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
KRT9P35527 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
KRT9P35527 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
KRT9P35527 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC15.79■□□□□ 0.12
KRT9P35527 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC15.79■□□□□ 0.12
KRT9P35527 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
KRT9P35527 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRT9P35527 AL928654.5-201ENST00000624831 2501 ntBASIC15.78■□□□□ 0.12
KRT9P35527 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRT9P35527 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRT9P35527 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC15.78■□□□□ 0.12
KRT9P35527 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRT9P35527 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRT9P35527 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
KRT9P35527 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.78■□□□□ 0.12
KRT9P35527 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC15.78■□□□□ 0.12
KRT9P35527 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRT9P35527 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRT9P35527 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
KRT9P35527 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRT9P35527 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRT9P35527 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRT9P35527 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRT9P35527 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
KRT9P35527 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
KRT9P35527 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
KRT9P35527 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
KRT9P35527 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRT9P35527 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.78■□□□□ 0.12
KRT9P35527 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
KRT9P35527 AC078819.1-201ENST00000547454 765 ntBASIC15.78■□□□□ 0.12
KRT9P35527 AC012085.1-201ENST00000548270 765 ntBASIC15.78■□□□□ 0.12
KRT9P35527 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRT9P35527 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.78■□□□□ 0.12
KRT9P35527 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.78■□□□□ 0.12
KRT9P35527 BAP1-211ENST00000615113 489 ntBASIC15.78■□□□□ 0.12
KRT9P35527 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.78■□□□□ 0.12
KRT9P35527 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRT9P35527 AC019294.4-201ENST00000561777 2905 ntBASIC15.78■□□□□ 0.12
KRT9P35527 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
KRT9P35527 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
KRT9P35527 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC15.78■□□□□ 0.12
KRT9P35527 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC15.78■□□□□ 0.12
KRT9P35527 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
KRT9P35527 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC15.78■□□□□ 0.12
KRT9P35527 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
KRT9P35527 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRT9P35527 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
KRT9P35527 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
KRT9P35527 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
KRT9P35527 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC15.78■□□□□ 0.12
KRT9P35527 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC15.77■□□□□ 0.12
KRT9P35527 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
KRT9P35527 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
KRT9P35527 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
KRT9P35527 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms