Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RFC1P35251 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.19■□□□□ 0.02
RFC1P35251 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RFC1P35251 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.19■□□□□ 0.02
RFC1P35251 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.19■□□□□ 0.02
RFC1P35251 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RFC1P35251 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC15.19■□□□□ 0.02
RFC1P35251 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.19■□□□□ 0.02
RFC1P35251 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC15.19■□□□□ 0.02
RFC1P35251 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC15.19■□□□□ 0.02
RFC1P35251 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RFC1P35251 BEND3P1-201ENST00000421591 1944 ntBASIC15.19■□□□□ 0.02
RFC1P35251 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.19■□□□□ 0.02
RFC1P35251 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
RFC1P35251 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
RFC1P35251 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RFC1P35251 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RFC1P35251 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RFC1P35251 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RFC1P35251 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
RFC1P35251 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC15.19■□□□□ 0.02
RFC1P35251 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFC1P35251 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFC1P35251 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC15.18■□□□□ 0.02
RFC1P35251 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFC1P35251 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFC1P35251 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFC1P35251 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RFC1P35251 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFC1P35251 LINC02486-201ENST00000604157 3000 ntBASIC15.18■□□□□ 0.02
RFC1P35251 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
RFC1P35251 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFC1P35251 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFC1P35251 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
RFC1P35251 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RFC1P35251 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFC1P35251 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFC1P35251 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC15.18■□□□□ 0.02
RFC1P35251 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFC1P35251 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
RFC1P35251 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
RFC1P35251 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RFC1P35251 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.18■□□□□ 0.02
RFC1P35251 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
RFC1P35251 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RFC1P35251 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RFC1P35251 AC003686.1-201ENST00000550956 1034 ntBASIC15.18■□□□□ 0.02
RFC1P35251 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.18■□□□□ 0.02
RFC1P35251 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC15.18■□□□□ 0.02
RFC1P35251 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.18■□□□□ 0.02
RFC1P35251 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RFC1P35251 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC15.18■□□□□ 0.02
RFC1P35251 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.18■□□□□ 0.02
RFC1P35251 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC15.18■□□□□ 0.02
RFC1P35251 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC15.18■□□□□ 0.02
RFC1P35251 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC15.18■□□□□ 0.02
RFC1P35251 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
RFC1P35251 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFC1P35251 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC15.18■□□□□ 0.02
RFC1P35251 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC15.18■□□□□ 0.02
RFC1P35251 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC15.18■□□□□ 0.02
RFC1P35251 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC15.18■□□□□ 0.02
RFC1P35251 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFC1P35251 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC15.18■□□□□ 0.02
RFC1P35251 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RFC1P35251 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFC1P35251 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RFC1P35251 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC15.18■□□□□ 0.02
RFC1P35251 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RFC1P35251 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.18■□□□□ 0.02
RFC1P35251 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC15.18■□□□□ 0.02
RFC1P35251 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
RFC1P35251 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
RFC1P35251 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFC1P35251 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFC1P35251 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFC1P35251 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFC1P35251 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFC1P35251 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC15.17■□□□□ 0.02
RFC1P35251 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC15.17■□□□□ 0.02
RFC1P35251 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFC1P35251 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC15.17■□□□□ 0.02
RFC1P35251 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFC1P35251 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC15.17■□□□□ 0.02
RFC1P35251 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC15.17■□□□□ 0.02
RFC1P35251 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RFC1P35251 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC15.17■□□□□ 0.02
RFC1P35251 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFC1P35251 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC15.17■□□□□ 0.02
RFC1P35251 BTBD6P1-201ENST00000412176 1267 ntBASIC15.17■□□□□ 0.02
RFC1P35251 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RFC1P35251 RNMTL1P1-201ENST00000454103 560 ntBASIC15.17■□□□□ 0.02
RFC1P35251 AC006122.1-201ENST00000493323 440 ntBASIC15.17■□□□□ 0.02
RFC1P35251 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.17■□□□□ 0.02
RFC1P35251 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC15.17■□□□□ 0.02
RFC1P35251 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RFC1P35251 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.17■□□□□ 0.02
RFC1P35251 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC15.17■□□□□ 0.02
RFC1P35251 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.17■□□□□ 0.02
RFC1P35251 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms