Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1DP16402 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC12.25□□□□□ -0.45
HIST1H1DP16402 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
HIST1H1DP16402 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1DP16402 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1DP16402 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.25□□□□□ -0.45
HIST1H1DP16402 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.25□□□□□ -0.45
HIST1H1DP16402 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
HIST1H1DP16402 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC12.25□□□□□ -0.45
HIST1H1DP16402 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H1DP16402 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.24□□□□□ -0.45
HIST1H1DP16402 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H1DP16402 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H1DP16402 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H1DP16402 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H1DP16402 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
HIST1H1DP16402 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
HIST1H1DP16402 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H1DP16402 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H1DP16402 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H1DP16402 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H1DP16402 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC12.24□□□□□ -0.45
HIST1H1DP16402 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H1DP16402 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
HIST1H1DP16402 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
HIST1H1DP16402 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC12.24□□□□□ -0.45
HIST1H1DP16402 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H1DP16402 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H1DP16402 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H1DP16402 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H1DP16402 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
HIST1H1DP16402 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC12.24□□□□□ -0.45
HIST1H1DP16402 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
HIST1H1DP16402 AC136604.1-202ENST00000425471 771 ntBASIC12.24□□□□□ -0.45
HIST1H1DP16402 AL035414.1-201ENST00000451327 857 ntBASIC12.24□□□□□ -0.45
HIST1H1DP16402 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H1DP16402 AL359845.1-201ENST00000458202 1648 ntBASIC12.24□□□□□ -0.45
HIST1H1DP16402 PDIA3P1-201ENST00000471856 1510 ntBASIC12.24□□□□□ -0.45
HIST1H1DP16402 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H1DP16402 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC12.24□□□□□ -0.45
HIST1H1DP16402 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H1DP16402 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC12.24□□□□□ -0.45
HIST1H1DP16402 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC12.24□□□□□ -0.45
HIST1H1DP16402 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H1DP16402 NEU3-203ENST00000529024 581 ntTSL 3 BASIC12.24□□□□□ -0.45
HIST1H1DP16402 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC12.24□□□□□ -0.45
HIST1H1DP16402 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC12.24□□□□□ -0.45
HIST1H1DP16402 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC12.24□□□□□ -0.45
HIST1H1DP16402 AC106820.3-201ENST00000561653 397 ntBASIC12.24□□□□□ -0.45
HIST1H1DP16402 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.24□□□□□ -0.45
HIST1H1DP16402 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC12.24□□□□□ -0.45
HIST1H1DP16402 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC12.24□□□□□ -0.45
HIST1H1DP16402 AL445209.1-201ENST00000607269 3491 ntBASIC12.24□□□□□ -0.45
HIST1H1DP16402 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC12.24□□□□□ -0.45
HIST1H1DP16402 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H1DP16402 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
HIST1H1DP16402 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H1DP16402 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H1DP16402 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
HIST1H1DP16402 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC12.24□□□□□ -0.45
HIST1H1DP16402 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC12.24□□□□□ -0.45
HIST1H1DP16402 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H1DP16402 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H1DP16402 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
HIST1H1DP16402 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
HIST1H1DP16402 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.24□□□□□ -0.45
HIST1H1DP16402 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H1DP16402 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H1DP16402 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HIST1H1DP16402 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H1DP16402 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H1DP16402 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H1DP16402 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H1DP16402 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC12.23□□□□□ -0.45
HIST1H1DP16402 AP002761.4-201ENST00000565433 3361 ntBASIC12.23□□□□□ -0.45
HIST1H1DP16402 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H1DP16402 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H1DP16402 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H1DP16402 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H1DP16402 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H1DP16402 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H1DP16402 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC12.23□□□□□ -0.45
HIST1H1DP16402 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H1DP16402 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H1DP16402 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H1DP16402 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
HIST1H1DP16402 LBH-203ENST00000404397 543 ntTSL 4 BASIC12.23□□□□□ -0.45
HIST1H1DP16402 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC12.23□□□□□ -0.45
HIST1H1DP16402 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H1DP16402 ELK1P1-201ENST00000485699 580 ntBASIC12.23□□□□□ -0.45
HIST1H1DP16402 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
HIST1H1DP16402 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H1DP16402 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC12.23□□□□□ -0.45
HIST1H1DP16402 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H1DP16402 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC12.23□□□□□ -0.45
HIST1H1DP16402 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC12.23□□□□□ -0.45
HIST1H1DP16402 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
HIST1H1DP16402 AL132655.2-201ENST00000596276 594 ntBASIC12.23□□□□□ -0.45
HIST1H1DP16402 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H1DP16402 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms