Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CAPNS1P04632 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.35□□□□□ -0.11
CAPNS1P04632 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.35□□□□□ -0.11
CAPNS1P04632 EIF3FP3-201ENST00000434851 1086 ntBASIC14.35□□□□□ -0.11
CAPNS1P04632 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC14.35□□□□□ -0.11
CAPNS1P04632 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CAPNS1P04632 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC14.35□□□□□ -0.11
CAPNS1P04632 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC14.35□□□□□ -0.11
CAPNS1P04632 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC14.35□□□□□ -0.11
CAPNS1P04632 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CAPNS1P04632 DNM1P51-201ENST00000558149 522 ntBASIC14.35□□□□□ -0.11
CAPNS1P04632 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC14.35□□□□□ -0.11
CAPNS1P04632 AL031713.1-201ENST00000564813 661 ntBASIC14.35□□□□□ -0.11
CAPNS1P04632 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC14.35□□□□□ -0.11
CAPNS1P04632 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC14.35□□□□□ -0.11
CAPNS1P04632 DGAT2L7P-201ENST00000602462 744 ntBASIC14.35□□□□□ -0.11
CAPNS1P04632 RNF146-211ENST00000609447 607 ntTSL 4 BASIC14.35□□□□□ -0.11
CAPNS1P04632 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC14.35□□□□□ -0.11
CAPNS1P04632 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CAPNS1P04632 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CAPNS1P04632 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CAPNS1P04632 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CAPNS1P04632 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CAPNS1P04632 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CAPNS1P04632 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.35□□□□□ -0.11
CAPNS1P04632 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CAPNS1P04632 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CAPNS1P04632 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.35□□□□□ -0.11
CAPNS1P04632 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CAPNS1P04632 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CAPNS1P04632 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.35□□□□□ -0.11
CAPNS1P04632 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CAPNS1P04632 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.35□□□□□ -0.11
CAPNS1P04632 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CAPNS1P04632 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAPNS1P04632 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.34□□□□□ -0.11
CAPNS1P04632 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CAPNS1P04632 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.34□□□□□ -0.11
CAPNS1P04632 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.34□□□□□ -0.11
CAPNS1P04632 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.34□□□□□ -0.11
CAPNS1P04632 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CAPNS1P04632 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAPNS1P04632 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CAPNS1P04632 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAPNS1P04632 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CAPNS1P04632 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAPNS1P04632 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CAPNS1P04632 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAPNS1P04632 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAPNS1P04632 AC012362.1-201ENST00000434906 739 ntBASIC14.34□□□□□ -0.11
CAPNS1P04632 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC14.34□□□□□ -0.11
CAPNS1P04632 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.34□□□□□ -0.11
CAPNS1P04632 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC14.34□□□□□ -0.11
CAPNS1P04632 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC14.34□□□□□ -0.11
CAPNS1P04632 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.34□□□□□ -0.11
CAPNS1P04632 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAPNS1P04632 RPL17P45-201ENST00000586289 509 ntBASIC14.34□□□□□ -0.11
CAPNS1P04632 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC14.34□□□□□ -0.11
CAPNS1P04632 AL132994.2-201ENST00000603120 687 ntBASIC14.34□□□□□ -0.11
CAPNS1P04632 AP003392.6-201ENST00000607709 325 ntBASIC14.34□□□□□ -0.11
CAPNS1P04632 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.34□□□□□ -0.11
CAPNS1P04632 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.34□□□□□ -0.11
CAPNS1P04632 AL132780.4-201ENST00000624870 1135 ntBASIC14.34□□□□□ -0.11
CAPNS1P04632 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC14.34□□□□□ -0.11
CAPNS1P04632 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC14.34□□□□□ -0.11
CAPNS1P04632 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.34□□□□□ -0.11
CAPNS1P04632 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAPNS1P04632 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.34□□□□□ -0.11
CAPNS1P04632 LRRC59-203ENST00000576448 1531 ntBASIC14.34□□□□□ -0.11
CAPNS1P04632 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.34□□□□□ -0.11
CAPNS1P04632 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CAPNS1P04632 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAPNS1P04632 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
CAPNS1P04632 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CAPNS1P04632 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CAPNS1P04632 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAPNS1P04632 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CAPNS1P04632 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CAPNS1P04632 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAPNS1P04632 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC14.34□□□□□ -0.11
CAPNS1P04632 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CAPNS1P04632 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CAPNS1P04632 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CAPNS1P04632 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.33□□□□□ -0.11
CAPNS1P04632 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CAPNS1P04632 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CAPNS1P04632 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC14.33□□□□□ -0.11
CAPNS1P04632 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
CAPNS1P04632 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
CAPNS1P04632 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CAPNS1P04632 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
CAPNS1P04632 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
CAPNS1P04632 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.33□□□□□ -0.12
CAPNS1P04632 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.33□□□□□ -0.12
CAPNS1P04632 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
CAPNS1P04632 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CAPNS1P04632 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CAPNS1P04632 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CAPNS1P04632 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CAPNS1P04632 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms