Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB13Q9Y5F0 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB13Q9Y5F0 MCEE-201ENST00000244217 835 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB13Q9Y5F0 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB13Q9Y5F0 MRPL47-202ENST00000392659 673 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB13Q9Y5F0 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
PCDHB13Q9Y5F0 HNRNPA1P27-201ENST00000412087 955 ntBASIC16.17■□□□□ 0.18
PCDHB13Q9Y5F0 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB13Q9Y5F0 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHB13Q9Y5F0 OLR1-203ENST00000432556 950 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHB13Q9Y5F0 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB13Q9Y5F0 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDHB13Q9Y5F0 BNIP3P42-201ENST00000454982 569 ntBASIC16.17■□□□□ 0.18
PCDHB13Q9Y5F0 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB13Q9Y5F0 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC16.17■□□□□ 0.18
PCDHB13Q9Y5F0 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB13Q9Y5F0 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB13Q9Y5F0 ACR-203ENST00000529621 708 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDHB13Q9Y5F0 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC16.17■□□□□ 0.18
PCDHB13Q9Y5F0 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHB13Q9Y5F0 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHB13Q9Y5F0 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHB13Q9Y5F0 AC132192.2-201ENST00000596206 1147 ntBASIC16.17■□□□□ 0.18
PCDHB13Q9Y5F0 BNIP3P29-201ENST00000598302 571 ntBASIC16.17■□□□□ 0.18
PCDHB13Q9Y5F0 AL359881.2-201ENST00000602973 570 ntBASIC16.17■□□□□ 0.18
PCDHB13Q9Y5F0 AC100814.1-201ENST00000606963 623 ntBASIC16.17■□□□□ 0.18
PCDHB13Q9Y5F0 AC011447.5-201ENST00000616168 564 ntBASIC16.17■□□□□ 0.18
PCDHB13Q9Y5F0 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHB13Q9Y5F0 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
PCDHB13Q9Y5F0 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHB13Q9Y5F0 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHB13Q9Y5F0 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHB13Q9Y5F0 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
PCDHB13Q9Y5F0 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHB13Q9Y5F0 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
PCDHB13Q9Y5F0 E2F3P2-201ENST00000447755 1422 ntBASIC16.17■□□□□ 0.18
PCDHB13Q9Y5F0 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDHB13Q9Y5F0 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC16.17■□□□□ 0.18
PCDHB13Q9Y5F0 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB13Q9Y5F0 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
PCDHB13Q9Y5F0 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB13Q9Y5F0 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
PCDHB13Q9Y5F0 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB13Q9Y5F0 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHB13Q9Y5F0 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHB13Q9Y5F0 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB13Q9Y5F0 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB13Q9Y5F0 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB13Q9Y5F0 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB13Q9Y5F0 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
PCDHB13Q9Y5F0 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB13Q9Y5F0 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB13Q9Y5F0 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHB13Q9Y5F0 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB13Q9Y5F0 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB13Q9Y5F0 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB13Q9Y5F0 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB13Q9Y5F0 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB13Q9Y5F0 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB13Q9Y5F0 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB13Q9Y5F0 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PCDHB13Q9Y5F0 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB13Q9Y5F0 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB13Q9Y5F0 LYG1-201ENST00000308528 990 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB13Q9Y5F0 NDUFAB1P1-201ENST00000404262 460 ntBASIC16.16■□□□□ 0.18
PCDHB13Q9Y5F0 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.16■□□□□ 0.18
PCDHB13Q9Y5F0 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC16.16■□□□□ 0.18
PCDHB13Q9Y5F0 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHB13Q9Y5F0 FAM58BP-201ENST00000439056 645 ntBASIC16.16■□□□□ 0.18
PCDHB13Q9Y5F0 MTND6P32-201ENST00000457611 483 ntBASIC16.16■□□□□ 0.18
PCDHB13Q9Y5F0 AC004918.1-201ENST00000467537 770 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHB13Q9Y5F0 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB13Q9Y5F0 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC16.16■□□□□ 0.18
PCDHB13Q9Y5F0 AC098862.1-201ENST00000504991 413 ntBASIC16.16■□□□□ 0.18
PCDHB13Q9Y5F0 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB13Q9Y5F0 RNF41-210ENST00000552244 716 ntTSL 3 BASIC16.16■□□□□ 0.18
PCDHB13Q9Y5F0 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC16.16■□□□□ 0.18
PCDHB13Q9Y5F0 AC027237.1-201ENST00000560942 655 ntBASIC16.16■□□□□ 0.18
PCDHB13Q9Y5F0 AC008686.1-201ENST00000586894 565 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHB13Q9Y5F0 AC009955.4-201ENST00000597192 544 ntBASIC16.16■□□□□ 0.18
PCDHB13Q9Y5F0 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHB13Q9Y5F0 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHB13Q9Y5F0 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PCDHB13Q9Y5F0 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB13Q9Y5F0 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB13Q9Y5F0 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB13Q9Y5F0 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHB13Q9Y5F0 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB13Q9Y5F0 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB13Q9Y5F0 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PCDHB13Q9Y5F0 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHB13Q9Y5F0 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB13Q9Y5F0 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB13Q9Y5F0 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PCDHB13Q9Y5F0 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB13Q9Y5F0 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHB13Q9Y5F0 AC012617.1-204ENST00000586340 2305 ntBASIC16.16■□□□□ 0.18
PCDHB13Q9Y5F0 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PCDHB13Q9Y5F0 FUK-202ENST00000378912 3925 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHB13Q9Y5F0 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms