Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CTDP1Q9Y5B0 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTDP1Q9Y5B0 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CTDP1Q9Y5B0 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTDP1Q9Y5B0 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTDP1Q9Y5B0 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CTDP1Q9Y5B0 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTDP1Q9Y5B0 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CTDP1Q9Y5B0 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC16.63■□□□□ 0.25
CTDP1Q9Y5B0 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTDP1Q9Y5B0 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTDP1Q9Y5B0 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTDP1Q9Y5B0 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTDP1Q9Y5B0 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC16.63■□□□□ 0.25
CTDP1Q9Y5B0 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTDP1Q9Y5B0 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTDP1Q9Y5B0 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTDP1Q9Y5B0 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTDP1Q9Y5B0 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC16.63■□□□□ 0.25
CTDP1Q9Y5B0 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTDP1Q9Y5B0 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CTDP1Q9Y5B0 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC16.63■□□□□ 0.25
CTDP1Q9Y5B0 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTDP1Q9Y5B0 AC073869.2-201ENST00000417338 1026 ntBASIC16.63■□□□□ 0.25
CTDP1Q9Y5B0 AC253536.4-201ENST00000440539 267 ntBASIC16.63■□□□□ 0.25
CTDP1Q9Y5B0 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC16.63■□□□□ 0.25
CTDP1Q9Y5B0 ALG1L13P-202ENST00000519320 584 ntBASIC16.63■□□□□ 0.25
CTDP1Q9Y5B0 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC16.63■□□□□ 0.25
CTDP1Q9Y5B0 AC135983.4-201ENST00000564116 1262 ntBASIC16.63■□□□□ 0.25
CTDP1Q9Y5B0 MIR4522-201ENST00000584932 87 ntBASIC16.63■□□□□ 0.25
CTDP1Q9Y5B0 WDR7-208ENST00000589935 544 ntTSL 4 BASIC16.63■□□□□ 0.25
CTDP1Q9Y5B0 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC16.63■□□□□ 0.25
CTDP1Q9Y5B0 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CTDP1Q9Y5B0 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.63■□□□□ 0.25
CTDP1Q9Y5B0 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTDP1Q9Y5B0 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC16.63■□□□□ 0.25
CTDP1Q9Y5B0 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.63■□□□□ 0.25
CTDP1Q9Y5B0 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTDP1Q9Y5B0 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTDP1Q9Y5B0 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC16.63■□□□□ 0.25
CTDP1Q9Y5B0 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CTDP1Q9Y5B0 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CTDP1Q9Y5B0 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTDP1Q9Y5B0 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTDP1Q9Y5B0 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
CTDP1Q9Y5B0 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CTDP1Q9Y5B0 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTDP1Q9Y5B0 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTDP1Q9Y5B0 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTDP1Q9Y5B0 AC015656.1-201ENST00000624209 3578 ntBASIC16.62■□□□□ 0.25
CTDP1Q9Y5B0 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTDP1Q9Y5B0 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTDP1Q9Y5B0 RDX-218ENST00000544551 4117 ntTSL 2 BASIC16.62■□□□□ 0.25
CTDP1Q9Y5B0 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CTDP1Q9Y5B0 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
CTDP1Q9Y5B0 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTDP1Q9Y5B0 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTDP1Q9Y5B0 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CTDP1Q9Y5B0 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTDP1Q9Y5B0 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC16.62■□□□□ 0.25
CTDP1Q9Y5B0 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CTDP1Q9Y5B0 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
CTDP1Q9Y5B0 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC16.62■□□□□ 0.25
CTDP1Q9Y5B0 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CTDP1Q9Y5B0 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTDP1Q9Y5B0 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTDP1Q9Y5B0 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CTDP1Q9Y5B0 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTDP1Q9Y5B0 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTDP1Q9Y5B0 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CTDP1Q9Y5B0 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC16.62■□□□□ 0.25
CTDP1Q9Y5B0 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC16.62■□□□□ 0.25
CTDP1Q9Y5B0 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CTDP1Q9Y5B0 AC092580.1-201ENST00000433998 658 ntBASIC16.62■□□□□ 0.25
CTDP1Q9Y5B0 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC16.62■□□□□ 0.25
CTDP1Q9Y5B0 PARP8-206ENST00000503665 572 ntTSL 4 BASIC16.62■□□□□ 0.25
CTDP1Q9Y5B0 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC16.62■□□□□ 0.25
CTDP1Q9Y5B0 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC16.62■□□□□ 0.25
CTDP1Q9Y5B0 FOS-204ENST00000554617 796 ntTSL 2 BASIC16.62■□□□□ 0.25
CTDP1Q9Y5B0 SKA2-205ENST00000580541 689 ntTSL 3 BASIC16.62■□□□□ 0.25
CTDP1Q9Y5B0 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC16.62■□□□□ 0.25
CTDP1Q9Y5B0 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC16.62■□□□□ 0.25
CTDP1Q9Y5B0 AC242376.2-201ENST00000619355 883 ntBASIC16.62■□□□□ 0.25
CTDP1Q9Y5B0 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC16.62■□□□□ 0.25
CTDP1Q9Y5B0 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTDP1Q9Y5B0 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTDP1Q9Y5B0 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CTDP1Q9Y5B0 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC16.62■□□□□ 0.25
CTDP1Q9Y5B0 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTDP1Q9Y5B0 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CTDP1Q9Y5B0 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTDP1Q9Y5B0 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC16.62■□□□□ 0.25
CTDP1Q9Y5B0 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTDP1Q9Y5B0 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTDP1Q9Y5B0 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CTDP1Q9Y5B0 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.62■□□□□ 0.25
CTDP1Q9Y5B0 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC16.61■□□□□ 0.25
CTDP1Q9Y5B0 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.61■□□□□ 0.25
CTDP1Q9Y5B0 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
CTDP1Q9Y5B0 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms