Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 AC239868.1-201ENST00000369385 493 ntBASIC14.4□□□□□ -0.1
SPASTQ9UBP0 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SPASTQ9UBP0 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SPASTQ9UBP0 PDIA3P2-201ENST00000428073 158 ntBASIC14.4□□□□□ -0.1
SPASTQ9UBP0 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC14.4□□□□□ -0.1
SPASTQ9UBP0 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC14.4□□□□□ -0.1
SPASTQ9UBP0 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC14.4□□□□□ -0.1
SPASTQ9UBP0 RTN3P1-201ENST00000536295 711 ntBASIC14.4□□□□□ -0.1
SPASTQ9UBP0 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC14.4□□□□□ -0.1
SPASTQ9UBP0 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SPASTQ9UBP0 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.4□□□□□ -0.1
SPASTQ9UBP0 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPASTQ9UBP0 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPASTQ9UBP0 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SPASTQ9UBP0 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.4□□□□□ -0.1
SPASTQ9UBP0 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPASTQ9UBP0 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
SPASTQ9UBP0 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPASTQ9UBP0 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPASTQ9UBP0 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPASTQ9UBP0 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPASTQ9UBP0 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SPASTQ9UBP0 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SPASTQ9UBP0 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.4□□□□□ -0.1
SPASTQ9UBP0 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPASTQ9UBP0 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.4□□□□□ -0.1
SPASTQ9UBP0 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.4□□□□□ -0.1
SPASTQ9UBP0 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SPASTQ9UBP0 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SPASTQ9UBP0 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SPASTQ9UBP0 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC14.4□□□□□ -0.1
SPASTQ9UBP0 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.4□□□□□ -0.1
SPASTQ9UBP0 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPASTQ9UBP0 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
SPASTQ9UBP0 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SPASTQ9UBP0 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPASTQ9UBP0 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPASTQ9UBP0 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC14.39□□□□□ -0.11
SPASTQ9UBP0 AC005840.4-201ENST00000541242 2494 ntBASIC14.39□□□□□ -0.11
SPASTQ9UBP0 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.39□□□□□ -0.11
SPASTQ9UBP0 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.39□□□□□ -0.11
SPASTQ9UBP0 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPASTQ9UBP0 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPASTQ9UBP0 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPASTQ9UBP0 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SPASTQ9UBP0 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SPASTQ9UBP0 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPASTQ9UBP0 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPASTQ9UBP0 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SPASTQ9UBP0 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SPASTQ9UBP0 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SPASTQ9UBP0 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
SPASTQ9UBP0 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SPASTQ9UBP0 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
SPASTQ9UBP0 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPASTQ9UBP0 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPASTQ9UBP0 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
SPASTQ9UBP0 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPASTQ9UBP0 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.39□□□□□ -0.11
SPASTQ9UBP0 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SPASTQ9UBP0 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.39□□□□□ -0.11
SPASTQ9UBP0 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC14.39□□□□□ -0.11
SPASTQ9UBP0 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.39□□□□□ -0.11
SPASTQ9UBP0 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC14.39□□□□□ -0.11
SPASTQ9UBP0 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.39□□□□□ -0.11
SPASTQ9UBP0 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.39□□□□□ -0.11
SPASTQ9UBP0 AC103988.2-201ENST00000561804 725 ntBASIC14.39□□□□□ -0.11
SPASTQ9UBP0 AL133499.1-201ENST00000596207 608 ntBASIC14.39□□□□□ -0.11
SPASTQ9UBP0 AC012044.1-201ENST00000603431 297 ntBASIC14.39□□□□□ -0.11
SPASTQ9UBP0 AC128714.1-201ENST00000637035 887 ntBASIC14.39□□□□□ -0.11
SPASTQ9UBP0 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SPASTQ9UBP0 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPASTQ9UBP0 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
SPASTQ9UBP0 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPASTQ9UBP0 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SPASTQ9UBP0 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPASTQ9UBP0 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.39□□□□□ -0.11
SPASTQ9UBP0 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPASTQ9UBP0 AC117489.1-201ENST00000625169 3217 ntBASIC14.39□□□□□ -0.11
SPASTQ9UBP0 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SPASTQ9UBP0 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.39□□□□□ -0.11
SPASTQ9UBP0 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
SPASTQ9UBP0 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.39□□□□□ -0.11
SPASTQ9UBP0 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SPASTQ9UBP0 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC14.39□□□□□ -0.11
SPASTQ9UBP0 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPASTQ9UBP0 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SPASTQ9UBP0 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.39□□□□□ -0.11
SPASTQ9UBP0 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SPASTQ9UBP0 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SPASTQ9UBP0 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.39□□□□□ -0.11
SPASTQ9UBP0 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SPASTQ9UBP0 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.38□□□□□ -0.11
SPASTQ9UBP0 AC092135.3-201ENST00000624151 1846 ntBASIC14.38□□□□□ -0.11
SPASTQ9UBP0 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SPASTQ9UBP0 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SPASTQ9UBP0 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SPASTQ9UBP0 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SPASTQ9UBP0 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SPASTQ9UBP0 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms