Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 CICP1-201ENST00000416803 2410 ntBASIC16.1■□□□□ 0.17
CBX8Q9HC52 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC16.1■□□□□ 0.17
CBX8Q9HC52 MSTO2P-201ENST00000314835 1709 ntBASIC16.1■□□□□ 0.17
CBX8Q9HC52 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CBX8Q9HC52 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC16.1■□□□□ 0.17
CBX8Q9HC52 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CBX8Q9HC52 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.1■□□□□ 0.17
CBX8Q9HC52 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC16.1■□□□□ 0.17
CBX8Q9HC52 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CBX8Q9HC52 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CBX8Q9HC52 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CBX8Q9HC52 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CBX8Q9HC52 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CBX8Q9HC52 AC026271.4-201ENST00000578214 1833 ntBASIC16.1■□□□□ 0.17
CBX8Q9HC52 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CBX8Q9HC52 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CBX8Q9HC52 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC16.1■□□□□ 0.17
CBX8Q9HC52 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CBX8Q9HC52 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CBX8Q9HC52 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
CBX8Q9HC52 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CBX8Q9HC52 PHB-210ENST00000511832 1509 ntTSL 2 BASIC16.09■□□□□ 0.17
CBX8Q9HC52 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CBX8Q9HC52 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CBX8Q9HC52 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CBX8Q9HC52 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CBX8Q9HC52 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CBX8Q9HC52 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CBX8Q9HC52 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CBX8Q9HC52 AC115284.2-201ENST00000624646 2054 ntBASIC16.09■□□□□ 0.17
CBX8Q9HC52 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC16.09■□□□□ 0.17
CBX8Q9HC52 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC16.09■□□□□ 0.17
CBX8Q9HC52 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CBX8Q9HC52 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CBX8Q9HC52 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CBX8Q9HC52 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC16.09■□□□□ 0.17
CBX8Q9HC52 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CBX8Q9HC52 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CBX8Q9HC52 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CBX8Q9HC52 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CBX8Q9HC52 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC16.09■□□□□ 0.17
CBX8Q9HC52 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC16.09■□□□□ 0.17
CBX8Q9HC52 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC16.09■□□□□ 0.17
CBX8Q9HC52 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CBX8Q9HC52 INE1-201ENST00000456273 945 ntBASIC16.09■□□□□ 0.17
CBX8Q9HC52 AL512638.1-201ENST00000457493 794 ntBASIC16.09■□□□□ 0.17
CBX8Q9HC52 AC011495.1-201ENST00000498085 584 ntBASIC16.09■□□□□ 0.17
CBX8Q9HC52 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CBX8Q9HC52 IGHVIII-5-2-201ENST00000522505 261 ntBASIC16.09■□□□□ 0.17
CBX8Q9HC52 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
CBX8Q9HC52 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.09■□□□□ 0.17
CBX8Q9HC52 TMEM261P1-201ENST00000604899 340 ntBASIC16.09■□□□□ 0.17
CBX8Q9HC52 AC145423.3-201ENST00000615987 467 ntBASIC16.09■□□□□ 0.17
CBX8Q9HC52 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.09■□□□□ 0.17
CBX8Q9HC52 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC16.09■□□□□ 0.17
CBX8Q9HC52 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC16.09■□□□□ 0.17
CBX8Q9HC52 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC16.09■□□□□ 0.17
CBX8Q9HC52 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CBX8Q9HC52 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CBX8Q9HC52 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC16.09■□□□□ 0.17
CBX8Q9HC52 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CBX8Q9HC52 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CBX8Q9HC52 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC16.09■□□□□ 0.17
CBX8Q9HC52 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CBX8Q9HC52 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CBX8Q9HC52 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CBX8Q9HC52 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC16.09■□□□□ 0.17
CBX8Q9HC52 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CBX8Q9HC52 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CBX8Q9HC52 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CBX8Q9HC52 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
CBX8Q9HC52 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
CBX8Q9HC52 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CBX8Q9HC52 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CBX8Q9HC52 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CBX8Q9HC52 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
CBX8Q9HC52 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CBX8Q9HC52 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CBX8Q9HC52 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
CBX8Q9HC52 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CBX8Q9HC52 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC16.08■□□□□ 0.16
CBX8Q9HC52 PCDHB19P-202ENST00000625133 2914 ntBASIC16.08■□□□□ 0.16
CBX8Q9HC52 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CBX8Q9HC52 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CBX8Q9HC52 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CBX8Q9HC52 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CBX8Q9HC52 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CBX8Q9HC52 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CBX8Q9HC52 GAS5-209ENST00000430245 723 ntTSL 3 BASIC16.08■□□□□ 0.16
CBX8Q9HC52 PTPA-215ENST00000432124 567 ntTSL 4 BASIC16.08■□□□□ 0.16
CBX8Q9HC52 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
CBX8Q9HC52 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CBX8Q9HC52 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CBX8Q9HC52 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.08■□□□□ 0.16
CBX8Q9HC52 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CBX8Q9HC52 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CBX8Q9HC52 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.08■□□□□ 0.16
CBX8Q9HC52 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CBX8Q9HC52 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC16.08■□□□□ 0.16
CBX8Q9HC52 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms