Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
UPF2Q9HAU5 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UPF2Q9HAU5 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UPF2Q9HAU5 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UPF2Q9HAU5 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UPF2Q9HAU5 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UPF2Q9HAU5 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
UPF2Q9HAU5 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UPF2Q9HAU5 ARSEP1-201ENST00000420443 635 ntBASIC17.75■□□□□ 0.43
UPF2Q9HAU5 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.75■□□□□ 0.43
UPF2Q9HAU5 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
UPF2Q9HAU5 GNAQP1-201ENST00000444815 1067 ntBASIC17.75■□□□□ 0.43
UPF2Q9HAU5 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.75■□□□□ 0.43
UPF2Q9HAU5 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.75■□□□□ 0.43
UPF2Q9HAU5 AC055876.2-201ENST00000531834 546 ntBASIC17.75■□□□□ 0.43
UPF2Q9HAU5 AL359711.2-201ENST00000563105 872 ntBASIC17.75■□□□□ 0.43
UPF2Q9HAU5 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.75■□□□□ 0.43
UPF2Q9HAU5 METTL26-214ENST00000614890 801 ntTSL 3 BASIC17.75■□□□□ 0.43
UPF2Q9HAU5 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UPF2Q9HAU5 AC093028.1-201ENST00000622998 982 ntBASIC17.75■□□□□ 0.43
UPF2Q9HAU5 MVK-217ENST00000639206 367 ntTSL 5 BASIC17.75■□□□□ 0.43
UPF2Q9HAU5 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
UPF2Q9HAU5 AC073957.3-201ENST00000609998 6758 ntBASIC17.75■□□□□ 0.43
UPF2Q9HAU5 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
UPF2Q9HAU5 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
UPF2Q9HAU5 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC17.74■□□□□ 0.43
UPF2Q9HAU5 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPF2Q9HAU5 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
UPF2Q9HAU5 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC17.74■□□□□ 0.43
UPF2Q9HAU5 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPF2Q9HAU5 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
UPF2Q9HAU5 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPF2Q9HAU5 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC17.74■□□□□ 0.43
UPF2Q9HAU5 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPF2Q9HAU5 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPF2Q9HAU5 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPF2Q9HAU5 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPF2Q9HAU5 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC17.74■□□□□ 0.43
UPF2Q9HAU5 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
UPF2Q9HAU5 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
UPF2Q9HAU5 ACKR1-201ENST00000368121 1240 ntBASIC17.74■□□□□ 0.43
UPF2Q9HAU5 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC17.74■□□□□ 0.43
UPF2Q9HAU5 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
UPF2Q9HAU5 AC004890.2-204ENST00000481968 304 ntBASIC17.74■□□□□ 0.43
UPF2Q9HAU5 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.74■□□□□ 0.43
UPF2Q9HAU5 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.74■□□□□ 0.43
UPF2Q9HAU5 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC17.74■□□□□ 0.43
UPF2Q9HAU5 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC17.74■□□□□ 0.43
UPF2Q9HAU5 AC099568.2-201ENST00000609194 695 ntBASIC17.74■□□□□ 0.43
UPF2Q9HAU5 BAP1-211ENST00000615113 489 ntBASIC17.74■□□□□ 0.43
UPF2Q9HAU5 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC17.74■□□□□ 0.43
UPF2Q9HAU5 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPF2Q9HAU5 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC17.74■□□□□ 0.43
UPF2Q9HAU5 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
UPF2Q9HAU5 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
UPF2Q9HAU5 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC17.74■□□□□ 0.43
UPF2Q9HAU5 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC17.74■□□□□ 0.43
UPF2Q9HAU5 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPF2Q9HAU5 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
UPF2Q9HAU5 AC009474.1-201ENST00000455096 1565 ntBASIC17.74■□□□□ 0.43
UPF2Q9HAU5 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
UPF2Q9HAU5 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPF2Q9HAU5 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UPF2Q9HAU5 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UPF2Q9HAU5 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
UPF2Q9HAU5 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
UPF2Q9HAU5 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UPF2Q9HAU5 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UPF2Q9HAU5 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UPF2Q9HAU5 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UPF2Q9HAU5 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
UPF2Q9HAU5 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
UPF2Q9HAU5 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
UPF2Q9HAU5 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
UPF2Q9HAU5 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
UPF2Q9HAU5 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
UPF2Q9HAU5 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UPF2Q9HAU5 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UPF2Q9HAU5 AL391647.1-201ENST00000395664 511 ntBASIC17.73■□□□□ 0.43
UPF2Q9HAU5 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
UPF2Q9HAU5 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.73■□□□□ 0.43
UPF2Q9HAU5 AL161932.2-201ENST00000435436 679 ntBASIC17.73■□□□□ 0.43
UPF2Q9HAU5 AC245100.3-201ENST00000441281 285 ntBASIC17.73■□□□□ 0.43
UPF2Q9HAU5 MESTP3-201ENST00000503460 968 ntBASIC17.73■□□□□ 0.43
UPF2Q9HAU5 AC093004.1-201ENST00000508850 424 ntBASIC17.73■□□□□ 0.43
UPF2Q9HAU5 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.73■□□□□ 0.43
UPF2Q9HAU5 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.73■□□□□ 0.43
UPF2Q9HAU5 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.73■□□□□ 0.43
UPF2Q9HAU5 AC133539.2-201ENST00000604757 467 ntBASIC17.73■□□□□ 0.43
UPF2Q9HAU5 AC093726.1-201ENST00000608064 963 ntBASIC17.73■□□□□ 0.43
UPF2Q9HAU5 AC004790.1-201ENST00000612686 536 ntBASIC17.73■□□□□ 0.43
UPF2Q9HAU5 OS9-218ENST00000551035 2246 ntTSL 2 BASIC17.73■□□□□ 0.43
UPF2Q9HAU5 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UPF2Q9HAU5 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
UPF2Q9HAU5 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC17.73■□□□□ 0.43
UPF2Q9HAU5 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC17.73■□□□□ 0.43
UPF2Q9HAU5 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
UPF2Q9HAU5 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
UPF2Q9HAU5 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
UPF2Q9HAU5 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms