Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 ALG3P1-201ENST00000508806 1114 ntBASIC13.53□□□□□ -0.24
AMBRA1Q9C0C7 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
AMBRA1Q9C0C7 AC009486.1-201ENST00000569860 813 ntBASIC13.53□□□□□ -0.24
AMBRA1Q9C0C7 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC13.53□□□□□ -0.24
AMBRA1Q9C0C7 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.53□□□□□ -0.24
AMBRA1Q9C0C7 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
AMBRA1Q9C0C7 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.53□□□□□ -0.24
AMBRA1Q9C0C7 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
AMBRA1Q9C0C7 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC13.53□□□□□ -0.24
AMBRA1Q9C0C7 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
AMBRA1Q9C0C7 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC13.53□□□□□ -0.24
AMBRA1Q9C0C7 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC13.53□□□□□ -0.24
AMBRA1Q9C0C7 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
AMBRA1Q9C0C7 MSTO2P-201ENST00000314835 1709 ntBASIC13.53□□□□□ -0.24
AMBRA1Q9C0C7 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
AMBRA1Q9C0C7 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
AMBRA1Q9C0C7 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
AMBRA1Q9C0C7 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC13.53□□□□□ -0.24
AMBRA1Q9C0C7 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
AMBRA1Q9C0C7 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
AMBRA1Q9C0C7 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC13.52□□□□□ -0.24
AMBRA1Q9C0C7 AC009093.2-202ENST00000620513 2079 ntBASIC13.52□□□□□ -0.24
AMBRA1Q9C0C7 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
AMBRA1Q9C0C7 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC13.52□□□□□ -0.24
AMBRA1Q9C0C7 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC13.52□□□□□ -0.24
AMBRA1Q9C0C7 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC13.52□□□□□ -0.24
AMBRA1Q9C0C7 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC13.52□□□□□ -0.24
AMBRA1Q9C0C7 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
AMBRA1Q9C0C7 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
AMBRA1Q9C0C7 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC13.52□□□□□ -0.24
AMBRA1Q9C0C7 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.52□□□□□ -0.24
AMBRA1Q9C0C7 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
AMBRA1Q9C0C7 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC13.52□□□□□ -0.24
AMBRA1Q9C0C7 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
AMBRA1Q9C0C7 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
AMBRA1Q9C0C7 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
AMBRA1Q9C0C7 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
AMBRA1Q9C0C7 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
AMBRA1Q9C0C7 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
AMBRA1Q9C0C7 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
AMBRA1Q9C0C7 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
AMBRA1Q9C0C7 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.52□□□□□ -0.25
AMBRA1Q9C0C7 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
AMBRA1Q9C0C7 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC13.52□□□□□ -0.25
AMBRA1Q9C0C7 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
AMBRA1Q9C0C7 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC13.52□□□□□ -0.25
AMBRA1Q9C0C7 PUDPP3-201ENST00000445368 636 ntBASIC13.52□□□□□ -0.25
AMBRA1Q9C0C7 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.52□□□□□ -0.25
AMBRA1Q9C0C7 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.52□□□□□ -0.25
AMBRA1Q9C0C7 FTLP10-202ENST00000505798 471 ntBASIC13.52□□□□□ -0.25
AMBRA1Q9C0C7 USP32P1-208ENST00000506594 1164 ntBASIC13.52□□□□□ -0.25
AMBRA1Q9C0C7 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.52□□□□□ -0.25
AMBRA1Q9C0C7 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
AMBRA1Q9C0C7 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.52□□□□□ -0.25
AMBRA1Q9C0C7 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.52□□□□□ -0.25
AMBRA1Q9C0C7 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.52□□□□□ -0.25
AMBRA1Q9C0C7 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.52□□□□□ -0.25
AMBRA1Q9C0C7 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.52□□□□□ -0.25
AMBRA1Q9C0C7 AC145423.3-201ENST00000615987 467 ntBASIC13.52□□□□□ -0.25
AMBRA1Q9C0C7 ENPP7P14-201ENST00000621765 1040 ntBASIC13.52□□□□□ -0.25
AMBRA1Q9C0C7 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
AMBRA1Q9C0C7 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.25
AMBRA1Q9C0C7 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
AMBRA1Q9C0C7 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
AMBRA1Q9C0C7 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
AMBRA1Q9C0C7 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
AMBRA1Q9C0C7 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
AMBRA1Q9C0C7 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.52□□□□□ -0.25
AMBRA1Q9C0C7 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.52□□□□□ -0.25
AMBRA1Q9C0C7 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
AMBRA1Q9C0C7 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
AMBRA1Q9C0C7 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
AMBRA1Q9C0C7 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
AMBRA1Q9C0C7 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC13.52□□□□□ -0.25
AMBRA1Q9C0C7 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
AMBRA1Q9C0C7 AL445209.1-201ENST00000607269 3491 ntBASIC13.52□□□□□ -0.25
AMBRA1Q9C0C7 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
AMBRA1Q9C0C7 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
AMBRA1Q9C0C7 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
AMBRA1Q9C0C7 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.52□□□□□ -0.25
AMBRA1Q9C0C7 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
AMBRA1Q9C0C7 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
AMBRA1Q9C0C7 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
AMBRA1Q9C0C7 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AMBRA1Q9C0C7 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AMBRA1Q9C0C7 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AMBRA1Q9C0C7 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC13.51□□□□□ -0.25
AMBRA1Q9C0C7 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AMBRA1Q9C0C7 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
AMBRA1Q9C0C7 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC13.51□□□□□ -0.25
AMBRA1Q9C0C7 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AMBRA1Q9C0C7 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
AMBRA1Q9C0C7 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC13.51□□□□□ -0.25
AMBRA1Q9C0C7 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC13.51□□□□□ -0.25
AMBRA1Q9C0C7 OS9-206ENST00000435406 2346 ntTSL 2 BASIC13.51□□□□□ -0.25
AMBRA1Q9C0C7 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC13.51□□□□□ -0.25
AMBRA1Q9C0C7 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AMBRA1Q9C0C7 AL022313.4-201ENST00000562756 2046 ntBASIC13.51□□□□□ -0.25
AMBRA1Q9C0C7 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AMBRA1Q9C0C7 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms