Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.13□□□□□ -0.31
USB1Q9BQ65 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
USB1Q9BQ65 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC13.13□□□□□ -0.31
USB1Q9BQ65 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.13□□□□□ -0.31
USB1Q9BQ65 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.13□□□□□ -0.31
USB1Q9BQ65 PTPA-218ENST00000435132 618 ntTSL 2 BASIC13.13□□□□□ -0.31
USB1Q9BQ65 AC006033.1-201ENST00000440505 426 ntBASIC13.13□□□□□ -0.31
USB1Q9BQ65 AL591846.1-201ENST00000451736 433 ntBASIC13.13□□□□□ -0.31
USB1Q9BQ65 KRT8P13-201ENST00000463294 1010 ntBASIC13.13□□□□□ -0.31
USB1Q9BQ65 AC026434.2-201ENST00000506094 1078 ntBASIC13.13□□□□□ -0.31
USB1Q9BQ65 ALG3P1-201ENST00000508806 1114 ntBASIC13.13□□□□□ -0.31
USB1Q9BQ65 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC13.13□□□□□ -0.31
USB1Q9BQ65 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.13□□□□□ -0.31
USB1Q9BQ65 AP001258.2-201ENST00000529891 490 ntBASIC13.13□□□□□ -0.31
USB1Q9BQ65 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC13.13□□□□□ -0.31
USB1Q9BQ65 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.13□□□□□ -0.31
USB1Q9BQ65 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
USB1Q9BQ65 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC13.13□□□□□ -0.31
USB1Q9BQ65 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC13.13□□□□□ -0.31
USB1Q9BQ65 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC13.13□□□□□ -0.31
USB1Q9BQ65 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC13.13□□□□□ -0.31
USB1Q9BQ65 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
USB1Q9BQ65 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC13.13□□□□□ -0.31
USB1Q9BQ65 KLK3-211ENST00000597483 810 ntTSL 2 BASIC13.13□□□□□ -0.31
USB1Q9BQ65 AC110792.4-201ENST00000609843 298 ntBASIC13.13□□□□□ -0.31
USB1Q9BQ65 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
USB1Q9BQ65 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
USB1Q9BQ65 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
USB1Q9BQ65 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
USB1Q9BQ65 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
USB1Q9BQ65 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
USB1Q9BQ65 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
USB1Q9BQ65 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
USB1Q9BQ65 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
USB1Q9BQ65 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.13□□□□□ -0.31
USB1Q9BQ65 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
USB1Q9BQ65 AC013726.1-201ENST00000563747 2285 ntBASIC13.13□□□□□ -0.31
USB1Q9BQ65 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
USB1Q9BQ65 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
USB1Q9BQ65 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.13□□□□□ -0.31
USB1Q9BQ65 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
USB1Q9BQ65 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
USB1Q9BQ65 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
USB1Q9BQ65 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC13.12□□□□□ -0.31
USB1Q9BQ65 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
USB1Q9BQ65 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.12□□□□□ -0.31
USB1Q9BQ65 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.12□□□□□ -0.31
USB1Q9BQ65 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
USB1Q9BQ65 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
USB1Q9BQ65 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.12□□□□□ -0.31
USB1Q9BQ65 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.12□□□□□ -0.31
USB1Q9BQ65 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
USB1Q9BQ65 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.12□□□□□ -0.31
USB1Q9BQ65 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.12□□□□□ -0.31
USB1Q9BQ65 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
USB1Q9BQ65 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
USB1Q9BQ65 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
USB1Q9BQ65 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
USB1Q9BQ65 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
USB1Q9BQ65 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
USB1Q9BQ65 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
USB1Q9BQ65 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
USB1Q9BQ65 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
USB1Q9BQ65 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC13.12□□□□□ -0.31
USB1Q9BQ65 MIR326-201ENST00000362220 95 ntBASIC13.12□□□□□ -0.31
USB1Q9BQ65 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
USB1Q9BQ65 NPM1P10-201ENST00000398310 865 ntBASIC13.12□□□□□ -0.31
USB1Q9BQ65 AL078595.1-201ENST00000404458 226 ntBASIC13.12□□□□□ -0.31
USB1Q9BQ65 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
USB1Q9BQ65 AC004945.1-201ENST00000416738 983 ntBASIC13.12□□□□□ -0.31
USB1Q9BQ65 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
USB1Q9BQ65 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13.12□□□□□ -0.31
USB1Q9BQ65 ATP6AP2-202ENST00000423649 1093 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
USB1Q9BQ65 MTND1P26-201ENST00000440488 538 ntBASIC13.12□□□□□ -0.31
USB1Q9BQ65 AL049651.1-201ENST00000440798 719 ntTSL 5 BASIC13.12□□□□□ -0.31
USB1Q9BQ65 CHMP1AP1-201ENST00000445563 662 ntBASIC13.12□□□□□ -0.31
USB1Q9BQ65 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC13.12□□□□□ -0.31
USB1Q9BQ65 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
USB1Q9BQ65 AC114322.1-201ENST00000506771 926 ntBASIC13.12□□□□□ -0.31
USB1Q9BQ65 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC13.12□□□□□ -0.31
USB1Q9BQ65 OSTCP1-202ENST00000522287 1195 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
USB1Q9BQ65 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
USB1Q9BQ65 LINC01571-201ENST00000563603 811 ntTSL 2 BASIC13.12□□□□□ -0.31
USB1Q9BQ65 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC13.12□□□□□ -0.31
USB1Q9BQ65 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.12□□□□□ -0.31
USB1Q9BQ65 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
USB1Q9BQ65 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.12□□□□□ -0.31
USB1Q9BQ65 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.12□□□□□ -0.31
USB1Q9BQ65 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
USB1Q9BQ65 KLK11-210ENST00000600362 759 ntTSL 3 BASIC13.12□□□□□ -0.31
USB1Q9BQ65 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC13.12□□□□□ -0.31
USB1Q9BQ65 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.12□□□□□ -0.31
USB1Q9BQ65 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
USB1Q9BQ65 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
USB1Q9BQ65 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
USB1Q9BQ65 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
USB1Q9BQ65 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
USB1Q9BQ65 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
USB1Q9BQ65 AL137783.1-201ENST00000623494 1896 ntBASIC13.12□□□□□ -0.31
USB1Q9BQ65 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms