Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
COL21A1Q96P44 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
COL21A1Q96P44 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.69□□□□□ -0.22
COL21A1Q96P44 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL21A1Q96P44 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
COL21A1Q96P44 AP006547.1-201ENST00000563435 692 ntBASIC13.69□□□□□ -0.22
COL21A1Q96P44 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.69□□□□□ -0.22
COL21A1Q96P44 DUX4L45-201ENST00000566406 1057 ntBASIC13.69□□□□□ -0.22
COL21A1Q96P44 MIR4683-201ENST00000579659 81 ntBASIC13.69□□□□□ -0.22
COL21A1Q96P44 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.69□□□□□ -0.22
COL21A1Q96P44 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL21A1Q96P44 AP001002.3-201ENST00000623482 206 ntBASIC13.69□□□□□ -0.22
COL21A1Q96P44 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC13.69□□□□□ -0.22
COL21A1Q96P44 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL21A1Q96P44 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC13.69□□□□□ -0.22
COL21A1Q96P44 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
COL21A1Q96P44 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
COL21A1Q96P44 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
COL21A1Q96P44 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL21A1Q96P44 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
COL21A1Q96P44 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL21A1Q96P44 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.69□□□□□ -0.22
COL21A1Q96P44 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL21A1Q96P44 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL21A1Q96P44 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL21A1Q96P44 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
COL21A1Q96P44 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
COL21A1Q96P44 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
COL21A1Q96P44 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.69□□□□□ -0.22
COL21A1Q96P44 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL21A1Q96P44 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
COL21A1Q96P44 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
COL21A1Q96P44 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
COL21A1Q96P44 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
COL21A1Q96P44 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL21A1Q96P44 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.68□□□□□ -0.22
COL21A1Q96P44 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL21A1Q96P44 KHSRPP1-201ENST00000427983 1768 ntBASIC13.68□□□□□ -0.22
COL21A1Q96P44 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.68□□□□□ -0.22
COL21A1Q96P44 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.68□□□□□ -0.22
COL21A1Q96P44 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.68□□□□□ -0.22
COL21A1Q96P44 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL21A1Q96P44 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
COL21A1Q96P44 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL21A1Q96P44 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL21A1Q96P44 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
COL21A1Q96P44 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL21A1Q96P44 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
COL21A1Q96P44 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
COL21A1Q96P44 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.68□□□□□ -0.22
COL21A1Q96P44 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.68□□□□□ -0.22
COL21A1Q96P44 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
COL21A1Q96P44 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
COL21A1Q96P44 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.68□□□□□ -0.22
COL21A1Q96P44 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL21A1Q96P44 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
COL21A1Q96P44 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL21A1Q96P44 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
COL21A1Q96P44 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
COL21A1Q96P44 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL21A1Q96P44 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
COL21A1Q96P44 ALG3P1-201ENST00000508806 1114 ntBASIC13.68□□□□□ -0.22
COL21A1Q96P44 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.68□□□□□ -0.22
COL21A1Q96P44 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC13.68□□□□□ -0.22
COL21A1Q96P44 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.68□□□□□ -0.22
COL21A1Q96P44 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.68□□□□□ -0.22
COL21A1Q96P44 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.68□□□□□ -0.22
COL21A1Q96P44 NAA38-206ENST00000576384 424 ntTSL 2 BASIC13.68□□□□□ -0.22
COL21A1Q96P44 AC010328.2-201ENST00000597698 1111 ntBASIC13.68□□□□□ -0.22
COL21A1Q96P44 BX088702.1-201ENST00000610784 235 ntBASIC13.68□□□□□ -0.22
COL21A1Q96P44 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
COL21A1Q96P44 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
COL21A1Q96P44 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.68□□□□□ -0.22
COL21A1Q96P44 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL21A1Q96P44 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL21A1Q96P44 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL21A1Q96P44 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL21A1Q96P44 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL21A1Q96P44 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL21A1Q96P44 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
COL21A1Q96P44 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL21A1Q96P44 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
COL21A1Q96P44 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.68□□□□□ -0.22
COL21A1Q96P44 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.68□□□□□ -0.22
COL21A1Q96P44 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
COL21A1Q96P44 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
COL21A1Q96P44 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL21A1Q96P44 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
COL21A1Q96P44 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.68□□□□□ -0.22
COL21A1Q96P44 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
COL21A1Q96P44 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL21A1Q96P44 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL21A1Q96P44 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL21A1Q96P44 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
COL21A1Q96P44 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL21A1Q96P44 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL21A1Q96P44 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.67□□□□□ -0.22
COL21A1Q96P44 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL21A1Q96P44 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
COL21A1Q96P44 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms