Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
VPS33AQ96AX1 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
VPS33AQ96AX1 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
VPS33AQ96AX1 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC13.91□□□□□ -0.18
VPS33AQ96AX1 AL591122.2-201ENST00000624125 1853 ntBASIC13.91□□□□□ -0.18
VPS33AQ96AX1 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC13.91□□□□□ -0.18
VPS33AQ96AX1 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
VPS33AQ96AX1 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VPS33AQ96AX1 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
VPS33AQ96AX1 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
VPS33AQ96AX1 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.91□□□□□ -0.18
VPS33AQ96AX1 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
VPS33AQ96AX1 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VPS33AQ96AX1 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VPS33AQ96AX1 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.91□□□□□ -0.18
VPS33AQ96AX1 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
VPS33AQ96AX1 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.91□□□□□ -0.18
VPS33AQ96AX1 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
VPS33AQ96AX1 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.91□□□□□ -0.18
VPS33AQ96AX1 FTLP10-202ENST00000505798 471 ntBASIC13.91□□□□□ -0.18
VPS33AQ96AX1 ALG3P1-201ENST00000508806 1114 ntBASIC13.91□□□□□ -0.18
VPS33AQ96AX1 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VPS33AQ96AX1 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.91□□□□□ -0.18
VPS33AQ96AX1 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
VPS33AQ96AX1 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC13.91□□□□□ -0.18
VPS33AQ96AX1 AL391825.1-201ENST00000457671 1364 ntBASIC13.91□□□□□ -0.18
VPS33AQ96AX1 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VPS33AQ96AX1 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VPS33AQ96AX1 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
VPS33AQ96AX1 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VPS33AQ96AX1 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
VPS33AQ96AX1 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
VPS33AQ96AX1 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VPS33AQ96AX1 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VPS33AQ96AX1 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
VPS33AQ96AX1 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VPS33AQ96AX1 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC13.91□□□□□ -0.18
VPS33AQ96AX1 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
VPS33AQ96AX1 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VPS33AQ96AX1 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VPS33AQ96AX1 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VPS33AQ96AX1 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VPS33AQ96AX1 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
VPS33AQ96AX1 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
VPS33AQ96AX1 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VPS33AQ96AX1 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
VPS33AQ96AX1 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC13.91□□□□□ -0.18
VPS33AQ96AX1 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VPS33AQ96AX1 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC13.9□□□□□ -0.18
VPS33AQ96AX1 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.9□□□□□ -0.18
VPS33AQ96AX1 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
VPS33AQ96AX1 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC13.9□□□□□ -0.18
VPS33AQ96AX1 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VPS33AQ96AX1 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
VPS33AQ96AX1 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VPS33AQ96AX1 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VPS33AQ96AX1 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VPS33AQ96AX1 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC13.9□□□□□ -0.18
VPS33AQ96AX1 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VPS33AQ96AX1 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC13.9□□□□□ -0.18
VPS33AQ96AX1 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VPS33AQ96AX1 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VPS33AQ96AX1 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.9□□□□□ -0.18
VPS33AQ96AX1 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.9□□□□□ -0.18
VPS33AQ96AX1 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VPS33AQ96AX1 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.9□□□□□ -0.18
VPS33AQ96AX1 AL162726.2-201ENST00000438986 1017 ntBASIC13.9□□□□□ -0.18
VPS33AQ96AX1 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VPS33AQ96AX1 INGX-202ENST00000489074 768 ntBASIC13.9□□□□□ -0.18
VPS33AQ96AX1 WFDC1-204ENST00000613603 549 ntBASIC13.9□□□□□ -0.18
VPS33AQ96AX1 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.9□□□□□ -0.18
VPS33AQ96AX1 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
VPS33AQ96AX1 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.9□□□□□ -0.18
VPS33AQ96AX1 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VPS33AQ96AX1 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VPS33AQ96AX1 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
VPS33AQ96AX1 AGAP12P-201ENST00000585227 2359 ntBASIC13.9□□□□□ -0.18
VPS33AQ96AX1 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
VPS33AQ96AX1 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VPS33AQ96AX1 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
VPS33AQ96AX1 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC13.9□□□□□ -0.18
VPS33AQ96AX1 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
VPS33AQ96AX1 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VPS33AQ96AX1 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
VPS33AQ96AX1 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VPS33AQ96AX1 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VPS33AQ96AX1 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
VPS33AQ96AX1 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
VPS33AQ96AX1 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
VPS33AQ96AX1 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
VPS33AQ96AX1 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
VPS33AQ96AX1 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
VPS33AQ96AX1 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.19
VPS33AQ96AX1 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VPS33AQ96AX1 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
VPS33AQ96AX1 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.89□□□□□ -0.19
VPS33AQ96AX1 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC13.89□□□□□ -0.19
VPS33AQ96AX1 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
VPS33AQ96AX1 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
VPS33AQ96AX1 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms