Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 KHSRPP1-201ENST00000427983 1768 ntBASIC12.85□□□□□ -0.35
RFT1Q96AA3 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RFT1Q96AA3 MPV17-208ENST00000405076 603 ntTSL 5 BASIC12.85□□□□□ -0.35
RFT1Q96AA3 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC12.85□□□□□ -0.35
RFT1Q96AA3 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC12.85□□□□□ -0.35
RFT1Q96AA3 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC12.85□□□□□ -0.35
RFT1Q96AA3 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC12.85□□□□□ -0.35
RFT1Q96AA3 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC12.85□□□□□ -0.35
RFT1Q96AA3 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC12.85□□□□□ -0.35
RFT1Q96AA3 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC12.85□□□□□ -0.35
RFT1Q96AA3 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RFT1Q96AA3 GLI4-203ENST00000517468 963 ntTSL 5 BASIC12.85□□□□□ -0.35
RFT1Q96AA3 FADS2-205ENST00000517839 469 ntTSL 3 BASIC12.85□□□□□ -0.35
RFT1Q96AA3 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RFT1Q96AA3 AC055876.2-201ENST00000531834 546 ntBASIC12.85□□□□□ -0.35
RFT1Q96AA3 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC12.85□□□□□ -0.35
RFT1Q96AA3 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC12.85□□□□□ -0.35
RFT1Q96AA3 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC12.85□□□□□ -0.35
RFT1Q96AA3 AL359711.2-201ENST00000563105 872 ntBASIC12.85□□□□□ -0.35
RFT1Q96AA3 NAA60-208ENST00000570819 833 ntTSL 2 BASIC12.85□□□□□ -0.35
RFT1Q96AA3 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC12.85□□□□□ -0.35
RFT1Q96AA3 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC12.85□□□□□ -0.35
RFT1Q96AA3 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC12.85□□□□□ -0.35
RFT1Q96AA3 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.85□□□□□ -0.35
RFT1Q96AA3 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RFT1Q96AA3 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
RFT1Q96AA3 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RFT1Q96AA3 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RFT1Q96AA3 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RFT1Q96AA3 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
RFT1Q96AA3 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RFT1Q96AA3 NCLP1-201ENST00000445357 1963 ntBASIC12.85□□□□□ -0.35
RFT1Q96AA3 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RFT1Q96AA3 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
RFT1Q96AA3 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
RFT1Q96AA3 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.85□□□□□ -0.35
RFT1Q96AA3 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RFT1Q96AA3 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
RFT1Q96AA3 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RFT1Q96AA3 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RFT1Q96AA3 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
RFT1Q96AA3 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RFT1Q96AA3 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.84□□□□□ -0.35
RFT1Q96AA3 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RFT1Q96AA3 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC12.84□□□□□ -0.35
RFT1Q96AA3 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RFT1Q96AA3 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC12.84□□□□□ -0.35
RFT1Q96AA3 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
RFT1Q96AA3 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.84□□□□□ -0.35
RFT1Q96AA3 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RFT1Q96AA3 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RFT1Q96AA3 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
RFT1Q96AA3 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RFT1Q96AA3 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC12.84□□□□□ -0.35
RFT1Q96AA3 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
RFT1Q96AA3 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RFT1Q96AA3 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC12.84□□□□□ -0.35
RFT1Q96AA3 MEP1AP4-201ENST00000423244 1087 ntBASIC12.84□□□□□ -0.35
RFT1Q96AA3 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC12.84□□□□□ -0.35
RFT1Q96AA3 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RFT1Q96AA3 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.84□□□□□ -0.35
RFT1Q96AA3 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RFT1Q96AA3 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
RFT1Q96AA3 AC022616.1-201ENST00000518688 554 ntBASIC12.84□□□□□ -0.35
RFT1Q96AA3 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC12.84□□□□□ -0.35
RFT1Q96AA3 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC12.84□□□□□ -0.35
RFT1Q96AA3 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC12.84□□□□□ -0.35
RFT1Q96AA3 IFT20-206ENST00000578122 834 ntTSL 2 BASIC12.84□□□□□ -0.35
RFT1Q96AA3 IFT20-208ENST00000578985 831 ntTSL 3 BASIC12.84□□□□□ -0.35
RFT1Q96AA3 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC12.84□□□□□ -0.35
RFT1Q96AA3 GOLGA8IP-202ENST00000611635 2100 ntBASIC12.84□□□□□ -0.35
RFT1Q96AA3 AC008761.3-201ENST00000624803 892 ntBASIC12.84□□□□□ -0.35
RFT1Q96AA3 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RFT1Q96AA3 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RFT1Q96AA3 AL157996.1-201ENST00000624684 2299 ntBASIC12.84□□□□□ -0.35
RFT1Q96AA3 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RFT1Q96AA3 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RFT1Q96AA3 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.84□□□□□ -0.35
RFT1Q96AA3 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RFT1Q96AA3 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RFT1Q96AA3 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
RFT1Q96AA3 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.84□□□□□ -0.35
RFT1Q96AA3 AL445209.1-201ENST00000607269 3491 ntBASIC12.84□□□□□ -0.35
RFT1Q96AA3 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RFT1Q96AA3 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RFT1Q96AA3 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RFT1Q96AA3 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RFT1Q96AA3 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC12.84□□□□□ -0.35
RFT1Q96AA3 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.84□□□□□ -0.35
RFT1Q96AA3 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RFT1Q96AA3 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC12.84□□□□□ -0.35
RFT1Q96AA3 AC073957.3-201ENST00000609998 6758 ntBASIC12.83□□□□□ -0.35
RFT1Q96AA3 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
RFT1Q96AA3 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.35
RFT1Q96AA3 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.35
RFT1Q96AA3 LRRC59-203ENST00000576448 1531 ntBASIC12.83□□□□□ -0.35
RFT1Q96AA3 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
RFT1Q96AA3 SLC7A15P-201ENST00000424028 1363 ntBASIC12.83□□□□□ -0.36
RFT1Q96AA3 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC12.83□□□□□ -0.36
RFT1Q96AA3 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms