Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
SMARCC2Q8TAQ2 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SMARCC2Q8TAQ2 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
SMARCC2Q8TAQ2 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC16.84■□□□□ 0.29
SMARCC2Q8TAQ2 AC072061.1-201ENST00000569710 2234 ntBASIC16.84■□□□□ 0.29
SMARCC2Q8TAQ2 OR2I1P-210ENST00000642037 4691 ntBASIC16.84■□□□□ 0.29
SMARCC2Q8TAQ2 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SMARCC2Q8TAQ2 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SMARCC2Q8TAQ2 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.29
SMARCC2Q8TAQ2 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SMARCC2Q8TAQ2 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
SMARCC2Q8TAQ2 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
SMARCC2Q8TAQ2 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMARCC2Q8TAQ2 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMARCC2Q8TAQ2 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMARCC2Q8TAQ2 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMARCC2Q8TAQ2 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMARCC2Q8TAQ2 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SMARCC2Q8TAQ2 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SMARCC2Q8TAQ2 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMARCC2Q8TAQ2 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SMARCC2Q8TAQ2 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMARCC2Q8TAQ2 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SMARCC2Q8TAQ2 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMARCC2Q8TAQ2 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMARCC2Q8TAQ2 NME6-203ENST00000415644 849 ntTSL 2 BASIC16.83■□□□□ 0.28
SMARCC2Q8TAQ2 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SMARCC2Q8TAQ2 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC16.83■□□□□ 0.28
SMARCC2Q8TAQ2 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC16.83■□□□□ 0.28
SMARCC2Q8TAQ2 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC16.83■□□□□ 0.28
SMARCC2Q8TAQ2 AC104073.2-201ENST00000453737 312 ntBASIC16.83■□□□□ 0.28
SMARCC2Q8TAQ2 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC16.83■□□□□ 0.28
SMARCC2Q8TAQ2 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SMARCC2Q8TAQ2 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC16.83■□□□□ 0.28
SMARCC2Q8TAQ2 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC16.83■□□□□ 0.28
SMARCC2Q8TAQ2 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SMARCC2Q8TAQ2 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SMARCC2Q8TAQ2 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMARCC2Q8TAQ2 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
SMARCC2Q8TAQ2 AL133338.1-201ENST00000565695 1517 ntBASIC16.83■□□□□ 0.28
SMARCC2Q8TAQ2 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC16.83■□□□□ 0.28
SMARCC2Q8TAQ2 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC16.83■□□□□ 0.28
SMARCC2Q8TAQ2 PAM16-211ENST00000575848 518 ntTSL 3 BASIC16.83■□□□□ 0.28
SMARCC2Q8TAQ2 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SMARCC2Q8TAQ2 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC16.83■□□□□ 0.28
SMARCC2Q8TAQ2 AC008805.1-201ENST00000590892 364 ntBASIC16.83■□□□□ 0.28
SMARCC2Q8TAQ2 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SMARCC2Q8TAQ2 AL136295.7-201ENST00000619226 1200 ntBASIC16.83■□□□□ 0.28
SMARCC2Q8TAQ2 RPL35-206ENST00000629845 340 ntTSL 5 BASIC16.83■□□□□ 0.28
SMARCC2Q8TAQ2 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC16.83■□□□□ 0.28
SMARCC2Q8TAQ2 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMARCC2Q8TAQ2 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMARCC2Q8TAQ2 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SMARCC2Q8TAQ2 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
SMARCC2Q8TAQ2 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC16.83■□□□□ 0.28
SMARCC2Q8TAQ2 FAM90A12P-201ENST00000519497 2375 ntBASIC16.82■□□□□ 0.28
SMARCC2Q8TAQ2 FAM90A24P-201ENST00000520792 2369 ntBASIC16.82■□□□□ 0.28
SMARCC2Q8TAQ2 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMARCC2Q8TAQ2 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMARCC2Q8TAQ2 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SMARCC2Q8TAQ2 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SMARCC2Q8TAQ2 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SMARCC2Q8TAQ2 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC16.82■□□□□ 0.28
SMARCC2Q8TAQ2 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC16.82■□□□□ 0.28
SMARCC2Q8TAQ2 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SMARCC2Q8TAQ2 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMARCC2Q8TAQ2 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SMARCC2Q8TAQ2 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC16.82■□□□□ 0.28
SMARCC2Q8TAQ2 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC16.82■□□□□ 0.28
SMARCC2Q8TAQ2 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC16.82■□□□□ 0.28
SMARCC2Q8TAQ2 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC16.82■□□□□ 0.28
SMARCC2Q8TAQ2 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC16.82■□□□□ 0.28
SMARCC2Q8TAQ2 AC013355.1-201ENST00000562625 723 ntBASIC16.82■□□□□ 0.28
SMARCC2Q8TAQ2 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC16.82■□□□□ 0.28
SMARCC2Q8TAQ2 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC16.82■□□□□ 0.28
SMARCC2Q8TAQ2 AC090164.2-201ENST00000611487 516 ntBASIC16.82■□□□□ 0.28
SMARCC2Q8TAQ2 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC16.82■□□□□ 0.28
SMARCC2Q8TAQ2 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC16.82■□□□□ 0.28
SMARCC2Q8TAQ2 AC068587.8-201ENST00000641239 219 ntBASIC16.82■□□□□ 0.28
SMARCC2Q8TAQ2 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMARCC2Q8TAQ2 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMARCC2Q8TAQ2 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMARCC2Q8TAQ2 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SMARCC2Q8TAQ2 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMARCC2Q8TAQ2 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC16.82■□□□□ 0.28
SMARCC2Q8TAQ2 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC16.82■□□□□ 0.28
SMARCC2Q8TAQ2 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMARCC2Q8TAQ2 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMARCC2Q8TAQ2 TK2-221ENST00000620035 5060 ntTSL 2 BASIC16.82■□□□□ 0.28
SMARCC2Q8TAQ2 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMARCC2Q8TAQ2 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
SMARCC2Q8TAQ2 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMARCC2Q8TAQ2 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC16.82■□□□□ 0.28
SMARCC2Q8TAQ2 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMARCC2Q8TAQ2 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMARCC2Q8TAQ2 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SMARCC2Q8TAQ2 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC16.82■□□□□ 0.28
SMARCC2Q8TAQ2 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SMARCC2Q8TAQ2 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SMARCC2Q8TAQ2 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms