Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
LMO3Q8TAP4 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LMO3Q8TAP4 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC15.29■□□□□ 0.04
LMO3Q8TAP4 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LMO3Q8TAP4 OR8T1P-201ENST00000421347 918 ntBASIC15.29■□□□□ 0.04
LMO3Q8TAP4 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC15.29■□□□□ 0.04
LMO3Q8TAP4 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC15.29■□□□□ 0.04
LMO3Q8TAP4 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LMO3Q8TAP4 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
LMO3Q8TAP4 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
LMO3Q8TAP4 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC15.29■□□□□ 0.04
LMO3Q8TAP4 RN7SL455P-201ENST00000580629 282 ntBASIC15.29■□□□□ 0.04
LMO3Q8TAP4 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC15.29■□□□□ 0.04
LMO3Q8TAP4 AC026740.1-201ENST00000607068 791 ntBASIC15.29■□□□□ 0.04
LMO3Q8TAP4 MIR6869-201ENST00000619434 62 ntBASIC15.29■□□□□ 0.04
LMO3Q8TAP4 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LMO3Q8TAP4 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LMO3Q8TAP4 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC15.29■□□□□ 0.04
LMO3Q8TAP4 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC15.29■□□□□ 0.04
LMO3Q8TAP4 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LMO3Q8TAP4 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LMO3Q8TAP4 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC15.29■□□□□ 0.04
LMO3Q8TAP4 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LMO3Q8TAP4 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LMO3Q8TAP4 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
LMO3Q8TAP4 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LMO3Q8TAP4 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LMO3Q8TAP4 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LMO3Q8TAP4 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LMO3Q8TAP4 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC15.28■□□□□ 0.04
LMO3Q8TAP4 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LMO3Q8TAP4 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC15.28■□□□□ 0.04
LMO3Q8TAP4 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
LMO3Q8TAP4 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
LMO3Q8TAP4 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LMO3Q8TAP4 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
LMO3Q8TAP4 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LMO3Q8TAP4 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
LMO3Q8TAP4 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
LMO3Q8TAP4 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LMO3Q8TAP4 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC15.28■□□□□ 0.04
LMO3Q8TAP4 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LMO3Q8TAP4 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LMO3Q8TAP4 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
LMO3Q8TAP4 AC067931.2-201ENST00000623655 2003 ntBASIC15.28■□□□□ 0.04
LMO3Q8TAP4 STK25-235ENST00000543554 2556 ntTSL 2 BASIC15.28■□□□□ 0.04
LMO3Q8TAP4 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LMO3Q8TAP4 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LMO3Q8TAP4 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LMO3Q8TAP4 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LMO3Q8TAP4 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
LMO3Q8TAP4 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LMO3Q8TAP4 FAM86MP-201ENST00000340703 885 ntBASIC15.28■□□□□ 0.04
LMO3Q8TAP4 RNA5SP359-201ENST00000364838 113 ntBASIC15.28■□□□□ 0.04
LMO3Q8TAP4 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LMO3Q8TAP4 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
LMO3Q8TAP4 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LMO3Q8TAP4 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC15.28■□□□□ 0.04
LMO3Q8TAP4 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
LMO3Q8TAP4 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC15.28■□□□□ 0.04
LMO3Q8TAP4 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC15.28■□□□□ 0.04
LMO3Q8TAP4 MIR4538-201ENST00000581377 78 ntBASIC15.28■□□□□ 0.04
LMO3Q8TAP4 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LMO3Q8TAP4 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC15.28■□□□□ 0.04
LMO3Q8TAP4 AL022328.3-201ENST00000607943 679 ntBASIC15.28■□□□□ 0.04
LMO3Q8TAP4 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC15.28■□□□□ 0.04
LMO3Q8TAP4 MEG3_2.1-201ENST00000611456 105 ntBASIC15.28■□□□□ 0.04
LMO3Q8TAP4 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC15.28■□□□□ 0.04
LMO3Q8TAP4 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC15.28■□□□□ 0.04
LMO3Q8TAP4 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LMO3Q8TAP4 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LMO3Q8TAP4 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LMO3Q8TAP4 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LMO3Q8TAP4 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LMO3Q8TAP4 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
LMO3Q8TAP4 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LMO3Q8TAP4 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LMO3Q8TAP4 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LMO3Q8TAP4 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
LMO3Q8TAP4 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LMO3Q8TAP4 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LMO3Q8TAP4 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.28■□□□□ 0.04
LMO3Q8TAP4 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
LMO3Q8TAP4 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
LMO3Q8TAP4 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC15.27■□□□□ 0.04
LMO3Q8TAP4 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LMO3Q8TAP4 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.04
LMO3Q8TAP4 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
LMO3Q8TAP4 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LMO3Q8TAP4 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
LMO3Q8TAP4 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LMO3Q8TAP4 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LMO3Q8TAP4 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LMO3Q8TAP4 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
LMO3Q8TAP4 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.27■□□□□ 0.04
LMO3Q8TAP4 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LMO3Q8TAP4 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LMO3Q8TAP4 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LMO3Q8TAP4 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LMO3Q8TAP4 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms