Protein–RNA interactions for Protein: Q8N271

PROM2, Prominin-2, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2Q8N271 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PROM2Q8N271 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
PROM2Q8N271 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
PROM2Q8N271 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PROM2Q8N271 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PROM2Q8N271 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PROM2Q8N271 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC18.1■□□□□ 0.49
PROM2Q8N271 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.1■□□□□ 0.49
PROM2Q8N271 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.1■□□□□ 0.49
PROM2Q8N271 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PROM2Q8N271 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PROM2Q8N271 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18.1■□□□□ 0.49
PROM2Q8N271 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
PROM2Q8N271 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PROM2Q8N271 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PROM2Q8N271 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PROM2Q8N271 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PROM2Q8N271 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC18.1■□□□□ 0.49
PROM2Q8N271 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.1■□□□□ 0.49
PROM2Q8N271 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC18.09■□□□□ 0.49
PROM2Q8N271 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PROM2Q8N271 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PROM2Q8N271 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PROM2Q8N271 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.09■□□□□ 0.49
PROM2Q8N271 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PROM2Q8N271 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC18.09■□□□□ 0.49
PROM2Q8N271 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC18.09■□□□□ 0.49
PROM2Q8N271 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PROM2Q8N271 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PROM2Q8N271 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.09■□□□□ 0.49
PROM2Q8N271 C22orf42-201ENST00000382097 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PROM2Q8N271 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PROM2Q8N271 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PROM2Q8N271 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC18.09■□□□□ 0.49
PROM2Q8N271 AL008638.4-201ENST00000624792 1315 ntBASIC18.09■□□□□ 0.49
PROM2Q8N271 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PROM2Q8N271 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PROM2Q8N271 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PROM2Q8N271 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC18.09■□□□□ 0.49
PROM2Q8N271 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PROM2Q8N271 AC090820.1-201ENST00000519722 591 ntBASIC18.09■□□□□ 0.49
PROM2Q8N271 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
PROM2Q8N271 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC18.09■□□□□ 0.49
PROM2Q8N271 LINC01571-201ENST00000563603 811 ntTSL 2 BASIC18.09■□□□□ 0.49
PROM2Q8N271 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC18.09■□□□□ 0.49
PROM2Q8N271 AC048382.6-201ENST00000621980 1223 ntBASIC18.09■□□□□ 0.49
PROM2Q8N271 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PROM2Q8N271 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PROM2Q8N271 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
PROM2Q8N271 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PROM2Q8N271 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PROM2Q8N271 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC18.09■□□□□ 0.49
PROM2Q8N271 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PROM2Q8N271 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PROM2Q8N271 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PROM2Q8N271 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PROM2Q8N271 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PROM2Q8N271 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PROM2Q8N271 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
PROM2Q8N271 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PROM2Q8N271 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.08■□□□□ 0.49
PROM2Q8N271 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC18.08■□□□□ 0.49
PROM2Q8N271 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PROM2Q8N271 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PROM2Q8N271 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC18.08■□□□□ 0.49
PROM2Q8N271 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.08■□□□□ 0.49
PROM2Q8N271 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC18.08■□□□□ 0.49
PROM2Q8N271 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PROM2Q8N271 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
PROM2Q8N271 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PROM2Q8N271 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PROM2Q8N271 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
PROM2Q8N271 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
PROM2Q8N271 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC18.08■□□□□ 0.48
PROM2Q8N271 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PROM2Q8N271 HMGA1P2-201ENST00000430198 324 ntBASIC18.08■□□□□ 0.48
PROM2Q8N271 DUXAP7-201ENST00000431038 689 ntBASIC18.08■□□□□ 0.48
PROM2Q8N271 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC18.08■□□□□ 0.48
PROM2Q8N271 AC093534.1-201ENST00000504977 132 ntBASIC18.08■□□□□ 0.48
PROM2Q8N271 SLC25A15P3-201ENST00000505530 290 ntBASIC18.08■□□□□ 0.48
PROM2Q8N271 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC18.08■□□□□ 0.48
PROM2Q8N271 AC004923.3-201ENST00000527532 355 ntBASIC18.08■□□□□ 0.48
PROM2Q8N271 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC18.08■□□□□ 0.48
PROM2Q8N271 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC18.08■□□□□ 0.48
PROM2Q8N271 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PROM2Q8N271 AC007423.1-201ENST00000605009 627 ntBASIC18.08■□□□□ 0.48
PROM2Q8N271 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC18.08■□□□□ 0.48
PROM2Q8N271 AC016252.1-201ENST00000609721 474 ntBASIC18.08■□□□□ 0.48
PROM2Q8N271 AL450487.2-201ENST00000615934 407 ntBASIC18.08■□□□□ 0.48
PROM2Q8N271 AC020978.9-201ENST00000624380 1141 ntBASIC18.08■□□□□ 0.48
PROM2Q8N271 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PROM2Q8N271 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PROM2Q8N271 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PROM2Q8N271 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
PROM2Q8N271 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC18.08■□□□□ 0.48
PROM2Q8N271 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
PROM2Q8N271 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PROM2Q8N271 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
PROM2Q8N271 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PROM2Q8N271 AC007950.2-201ENST00000615045 2347 ntBASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms