Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC090136.2-201ENST00000517809 420 ntBASIC15.23■□□□□ 0.03
NPAS4Q8IUM7 TREHP1-201ENST00000531328 465 ntBASIC15.23■□□□□ 0.03
NPAS4Q8IUM7 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC15.23■□□□□ 0.03
NPAS4Q8IUM7 BATF-202ENST00000555504 361 ntTSL 2 BASIC15.23■□□□□ 0.03
NPAS4Q8IUM7 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS4Q8IUM7 AP005212.2-201ENST00000584979 510 ntBASIC15.23■□□□□ 0.03
NPAS4Q8IUM7 AC010632.2-201ENST00000588369 1224 ntBASIC15.23■□□□□ 0.03
NPAS4Q8IUM7 HMGB1P24-201ENST00000611897 328 ntBASIC15.23■□□□□ 0.03
NPAS4Q8IUM7 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS4Q8IUM7 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS4Q8IUM7 AC138761.6-201ENST00000583997 1423 ntBASIC15.23■□□□□ 0.03
NPAS4Q8IUM7 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS4Q8IUM7 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS4Q8IUM7 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS4Q8IUM7 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC15.23■□□□□ 0.03
NPAS4Q8IUM7 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS4Q8IUM7 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS4Q8IUM7 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS4Q8IUM7 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS4Q8IUM7 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS4Q8IUM7 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
NPAS4Q8IUM7 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS4Q8IUM7 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS4Q8IUM7 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS4Q8IUM7 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.22■□□□□ 0.03
NPAS4Q8IUM7 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS4Q8IUM7 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS4Q8IUM7 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.22■□□□□ 0.03
NPAS4Q8IUM7 AC004554.1-201ENST00000422830 1468 ntBASIC15.22■□□□□ 0.03
NPAS4Q8IUM7 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS4Q8IUM7 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.22■□□□□ 0.03
NPAS4Q8IUM7 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS4Q8IUM7 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
NPAS4Q8IUM7 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS4Q8IUM7 AP000354.1-201ENST00000396982 456 ntBASIC15.22■□□□□ 0.03
NPAS4Q8IUM7 OR51A9P-201ENST00000422578 911 ntBASIC15.22■□□□□ 0.03
NPAS4Q8IUM7 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC15.22■□□□□ 0.03
NPAS4Q8IUM7 KRT18P46-201ENST00000435568 1279 ntBASIC15.22■□□□□ 0.03
NPAS4Q8IUM7 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC15.22■□□□□ 0.03
NPAS4Q8IUM7 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC15.22■□□□□ 0.03
NPAS4Q8IUM7 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC15.22■□□□□ 0.03
NPAS4Q8IUM7 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC15.22■□□□□ 0.03
NPAS4Q8IUM7 THY1-209ENST00000580275 578 ntTSL 3 BASIC15.22■□□□□ 0.03
NPAS4Q8IUM7 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS4Q8IUM7 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
NPAS4Q8IUM7 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.22■□□□□ 0.03
NPAS4Q8IUM7 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS4Q8IUM7 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS4Q8IUM7 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
NPAS4Q8IUM7 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
NPAS4Q8IUM7 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
NPAS4Q8IUM7 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC15.22■□□□□ 0.03
NPAS4Q8IUM7 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPAS4Q8IUM7 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC15.22■□□□□ 0.03
NPAS4Q8IUM7 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC15.22■□□□□ 0.03
NPAS4Q8IUM7 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.22■□□□□ 0.03
NPAS4Q8IUM7 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC15.22■□□□□ 0.03
NPAS4Q8IUM7 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
NPAS4Q8IUM7 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.21■□□□□ 0.03
NPAS4Q8IUM7 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC15.21■□□□□ 0.03
NPAS4Q8IUM7 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NPAS4Q8IUM7 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NPAS4Q8IUM7 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.21■□□□□ 0.03
NPAS4Q8IUM7 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPAS4Q8IUM7 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPAS4Q8IUM7 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPAS4Q8IUM7 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NPAS4Q8IUM7 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPAS4Q8IUM7 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPAS4Q8IUM7 SURF4-203ENST00000371991 715 ntTSL 3 BASIC15.21■□□□□ 0.03
NPAS4Q8IUM7 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC15.21■□□□□ 0.03
NPAS4Q8IUM7 OR2W2P-201ENST00000406313 909 ntBASIC15.21■□□□□ 0.03
NPAS4Q8IUM7 MIR1301-201ENST00000408518 82 ntBASIC15.21■□□□□ 0.03
NPAS4Q8IUM7 RPL3P2-204ENST00000413027 1203 ntBASIC15.21■□□□□ 0.03
NPAS4Q8IUM7 STK24P1-201ENST00000455035 1291 ntBASIC15.21■□□□□ 0.03
NPAS4Q8IUM7 AC244197.1-201ENST00000456494 951 ntBASIC15.21■□□□□ 0.03
NPAS4Q8IUM7 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC15.21■□□□□ 0.03
NPAS4Q8IUM7 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NPAS4Q8IUM7 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC15.21■□□□□ 0.03
NPAS4Q8IUM7 AC100858.1-201ENST00000514059 1228 ntBASIC15.21■□□□□ 0.03
NPAS4Q8IUM7 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC15.21■□□□□ 0.03
NPAS4Q8IUM7 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
NPAS4Q8IUM7 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
NPAS4Q8IUM7 AL118516.1-201ENST00000564152 670 ntBASIC15.21■□□□□ 0.03
NPAS4Q8IUM7 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC15.21■□□□□ 0.03
NPAS4Q8IUM7 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NPAS4Q8IUM7 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPAS4Q8IUM7 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPAS4Q8IUM7 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPAS4Q8IUM7 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC15.21■□□□□ 0.03
NPAS4Q8IUM7 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NPAS4Q8IUM7 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC15.21■□□□□ 0.02
NPAS4Q8IUM7 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
NPAS4Q8IUM7 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC15.21■□□□□ 0.02
NPAS4Q8IUM7 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC15.21■□□□□ 0.02
NPAS4Q8IUM7 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC15.21■□□□□ 0.02
NPAS4Q8IUM7 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NPAS4Q8IUM7 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
NPAS4Q8IUM7 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NPAS4Q8IUM7 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms