Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.35□□□□□ -0.27
H3F3CQ6NXT2 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 AC091046.1-201ENST00000331871 207 ntBASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 OR2K2-202ENST00000374428 1038 ntBASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 HINT2P1-201ENST00000419438 481 ntBASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 AL161932.2-201ENST00000435436 679 ntBASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 AC019193.1-201ENST00000506678 823 ntBASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 AC021016.3-201ENST00000608367 477 ntBASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 AL022334.2-201ENST00000610000 484 ntBASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 AC103691.2-201ENST00000618824 433 ntBASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 AC215219.1-201ENST00000400706 1817 ntBASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
H3F3CQ6NXT2 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.33□□□□□ -0.27
H3F3CQ6NXT2 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
H3F3CQ6NXT2 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
H3F3CQ6NXT2 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.33□□□□□ -0.28
H3F3CQ6NXT2 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
H3F3CQ6NXT2 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
H3F3CQ6NXT2 KRT8P31-201ENST00000504812 1408 ntBASIC13.33□□□□□ -0.28
H3F3CQ6NXT2 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
H3F3CQ6NXT2 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
H3F3CQ6NXT2 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
H3F3CQ6NXT2 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.33□□□□□ -0.28
H3F3CQ6NXT2 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
H3F3CQ6NXT2 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
H3F3CQ6NXT2 AL627231.1-201ENST00000394467 1125 ntBASIC13.33□□□□□ -0.28
H3F3CQ6NXT2 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
H3F3CQ6NXT2 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC13.33□□□□□ -0.28
H3F3CQ6NXT2 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC13.33□□□□□ -0.28
H3F3CQ6NXT2 RPSAP15-201ENST00000448168 861 ntBASIC13.33□□□□□ -0.28
H3F3CQ6NXT2 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC13.33□□□□□ -0.28
H3F3CQ6NXT2 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC13.33□□□□□ -0.28
H3F3CQ6NXT2 RN7SL530P-201ENST00000485097 298 ntBASIC13.33□□□□□ -0.28
H3F3CQ6NXT2 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC13.33□□□□□ -0.28
H3F3CQ6NXT2 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC13.33□□□□□ -0.28
H3F3CQ6NXT2 AC140658.4-201ENST00000561990 352 ntBASIC13.33□□□□□ -0.28
H3F3CQ6NXT2 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
H3F3CQ6NXT2 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC13.33□□□□□ -0.28
H3F3CQ6NXT2 MIR3677-201ENST00000578964 60 ntBASIC13.33□□□□□ -0.28
H3F3CQ6NXT2 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC13.33□□□□□ -0.28
H3F3CQ6NXT2 AC051619.9-201ENST00000623237 597 ntBASIC13.33□□□□□ -0.28
H3F3CQ6NXT2 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
H3F3CQ6NXT2 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
H3F3CQ6NXT2 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms