Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM71Q2Q1W2 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.52■□□□□ 0.08
TRIM71Q2Q1W2 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.52■□□□□ 0.08
TRIM71Q2Q1W2 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM71Q2Q1W2 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM71Q2Q1W2 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM71Q2Q1W2 AC092384.3-202ENST00000564646 2873 ntBASIC15.52■□□□□ 0.08
TRIM71Q2Q1W2 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.52■□□□□ 0.08
TRIM71Q2Q1W2 NORAD-201ENST00000565493 5339 ntBASIC15.52■□□□□ 0.08
TRIM71Q2Q1W2 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM71Q2Q1W2 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
TRIM71Q2Q1W2 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM71Q2Q1W2 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
TRIM71Q2Q1W2 STK24P1-201ENST00000455035 1291 ntBASIC15.52■□□□□ 0.08
TRIM71Q2Q1W2 RN7SL582P-201ENST00000491078 279 ntBASIC15.52■□□□□ 0.08
TRIM71Q2Q1W2 PRSS3P1-201ENST00000503996 742 ntBASIC15.52■□□□□ 0.08
TRIM71Q2Q1W2 FOXN3-AS2-201ENST00000554071 1262 ntBASIC15.52■□□□□ 0.08
TRIM71Q2Q1W2 MT2A-202ENST00000561491 581 ntTSL 2 BASIC15.52■□□□□ 0.08
TRIM71Q2Q1W2 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC15.52■□□□□ 0.08
TRIM71Q2Q1W2 USB1-205ENST00000561743 1135 ntTSL 3 BASIC15.52■□□□□ 0.08
TRIM71Q2Q1W2 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM71Q2Q1W2 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC15.52■□□□□ 0.08
TRIM71Q2Q1W2 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.52■□□□□ 0.08
TRIM71Q2Q1W2 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM71Q2Q1W2 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM71Q2Q1W2 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
TRIM71Q2Q1W2 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM71Q2Q1W2 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
TRIM71Q2Q1W2 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM71Q2Q1W2 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
TRIM71Q2Q1W2 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM71Q2Q1W2 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM71Q2Q1W2 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM71Q2Q1W2 TSPY26P-202ENST00000565928 3884 ntBASIC15.52■□□□□ 0.07
TRIM71Q2Q1W2 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
TRIM71Q2Q1W2 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM71Q2Q1W2 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM71Q2Q1W2 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM71Q2Q1W2 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
TRIM71Q2Q1W2 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC15.51■□□□□ 0.07
TRIM71Q2Q1W2 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM71Q2Q1W2 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM71Q2Q1W2 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM71Q2Q1W2 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM71Q2Q1W2 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TRIM71Q2Q1W2 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM71Q2Q1W2 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM71Q2Q1W2 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.51■□□□□ 0.07
TRIM71Q2Q1W2 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM71Q2Q1W2 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIM71Q2Q1W2 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM71Q2Q1W2 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM71Q2Q1W2 COX20P1-201ENST00000366529 357 ntBASIC15.51■□□□□ 0.07
TRIM71Q2Q1W2 AC103592.1-201ENST00000394513 664 ntBASIC15.51■□□□□ 0.07
TRIM71Q2Q1W2 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC15.51■□□□□ 0.07
TRIM71Q2Q1W2 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC15.51■□□□□ 0.07
TRIM71Q2Q1W2 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC15.51■□□□□ 0.07
TRIM71Q2Q1W2 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM71Q2Q1W2 KRT18P46-201ENST00000435568 1279 ntBASIC15.51■□□□□ 0.07
TRIM71Q2Q1W2 AC025186.1-201ENST00000478174 870 ntBASIC15.51■□□□□ 0.07
TRIM71Q2Q1W2 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC15.51■□□□□ 0.07
TRIM71Q2Q1W2 COX5A-205ENST00000568517 582 ntTSL 3 BASIC15.51■□□□□ 0.07
TRIM71Q2Q1W2 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
TRIM71Q2Q1W2 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TRIM71Q2Q1W2 MIR6746-201ENST00000620971 63 ntBASIC15.51■□□□□ 0.07
TRIM71Q2Q1W2 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIM71Q2Q1W2 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.51■□□□□ 0.07
TRIM71Q2Q1W2 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIM71Q2Q1W2 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM71Q2Q1W2 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM71Q2Q1W2 AL122018.1-201ENST00000446607 2310 ntBASIC15.51■□□□□ 0.07
TRIM71Q2Q1W2 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM71Q2Q1W2 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM71Q2Q1W2 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM71Q2Q1W2 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM71Q2Q1W2 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TRIM71Q2Q1W2 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.51■□□□□ 0.07
TRIM71Q2Q1W2 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM71Q2Q1W2 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM71Q2Q1W2 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM71Q2Q1W2 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM71Q2Q1W2 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.51■□□□□ 0.07
TRIM71Q2Q1W2 CICP14-201ENST00000629111 2732 ntBASIC15.51■□□□□ 0.07
TRIM71Q2Q1W2 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.5■□□□□ 0.07
TRIM71Q2Q1W2 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM71Q2Q1W2 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.5■□□□□ 0.07
TRIM71Q2Q1W2 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM71Q2Q1W2 SARS-202ENST00000369923 1882 ntTSL 5 BASIC15.5■□□□□ 0.07
TRIM71Q2Q1W2 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC15.5■□□□□ 0.07
TRIM71Q2Q1W2 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TRIM71Q2Q1W2 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TRIM71Q2Q1W2 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM71Q2Q1W2 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM71Q2Q1W2 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM71Q2Q1W2 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM71Q2Q1W2 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC15.5■□□□□ 0.07
TRIM71Q2Q1W2 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC15.5■□□□□ 0.07
TRIM71Q2Q1W2 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
TRIM71Q2Q1W2 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM71Q2Q1W2 LINC02228-204ENST00000642115 2962 ntBASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms