Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SHROOM1Q2M3G4 AC007952.5-201ENST00000572818 1486 ntBASIC16.61■□□□□ 0.25
SHROOM1Q2M3G4 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHROOM1Q2M3G4 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SHROOM1Q2M3G4 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHROOM1Q2M3G4 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SHROOM1Q2M3G4 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SHROOM1Q2M3G4 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC16.6■□□□□ 0.25
SHROOM1Q2M3G4 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SHROOM1Q2M3G4 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
SHROOM1Q2M3G4 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SHROOM1Q2M3G4 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHROOM1Q2M3G4 BAK1P1-201ENST00000317045 636 ntBASIC16.6■□□□□ 0.25
SHROOM1Q2M3G4 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC16.6■□□□□ 0.25
SHROOM1Q2M3G4 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SHROOM1Q2M3G4 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC16.6■□□□□ 0.25
SHROOM1Q2M3G4 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SHROOM1Q2M3G4 STK24P1-201ENST00000455035 1291 ntBASIC16.6■□□□□ 0.25
SHROOM1Q2M3G4 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC16.6■□□□□ 0.25
SHROOM1Q2M3G4 AL512310.5-201ENST00000551999 515 ntBASIC16.6■□□□□ 0.25
SHROOM1Q2M3G4 AC141586.1-203ENST00000567242 366 ntBASIC16.6■□□□□ 0.25
SHROOM1Q2M3G4 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC16.6■□□□□ 0.25
SHROOM1Q2M3G4 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SHROOM1Q2M3G4 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC16.6■□□□□ 0.25
SHROOM1Q2M3G4 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHROOM1Q2M3G4 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHROOM1Q2M3G4 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SHROOM1Q2M3G4 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHROOM1Q2M3G4 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
SHROOM1Q2M3G4 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SHROOM1Q2M3G4 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHROOM1Q2M3G4 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC16.6■□□□□ 0.25
SHROOM1Q2M3G4 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHROOM1Q2M3G4 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.6■□□□□ 0.25
SHROOM1Q2M3G4 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHROOM1Q2M3G4 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC16.6■□□□□ 0.25
SHROOM1Q2M3G4 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SHROOM1Q2M3G4 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHROOM1Q2M3G4 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
SHROOM1Q2M3G4 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHROOM1Q2M3G4 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SHROOM1Q2M3G4 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SHROOM1Q2M3G4 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC16.6■□□□□ 0.25
SHROOM1Q2M3G4 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC16.6■□□□□ 0.25
SHROOM1Q2M3G4 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SHROOM1Q2M3G4 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHROOM1Q2M3G4 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHROOM1Q2M3G4 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHROOM1Q2M3G4 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC16.59■□□□□ 0.25
SHROOM1Q2M3G4 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHROOM1Q2M3G4 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHROOM1Q2M3G4 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SHROOM1Q2M3G4 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHROOM1Q2M3G4 RPL3P2-204ENST00000413027 1203 ntBASIC16.59■□□□□ 0.25
SHROOM1Q2M3G4 OR52M2P-201ENST00000414298 959 ntBASIC16.59■□□□□ 0.25
SHROOM1Q2M3G4 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SHROOM1Q2M3G4 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC16.59■□□□□ 0.25
SHROOM1Q2M3G4 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC16.59■□□□□ 0.25
SHROOM1Q2M3G4 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC16.59■□□□□ 0.25
SHROOM1Q2M3G4 PDXDC2P-206ENST00000534700 1315 ntBASIC16.59■□□□□ 0.25
SHROOM1Q2M3G4 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SHROOM1Q2M3G4 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
SHROOM1Q2M3G4 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.59■□□□□ 0.25
SHROOM1Q2M3G4 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC16.59■□□□□ 0.25
SHROOM1Q2M3G4 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SHROOM1Q2M3G4 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SHROOM1Q2M3G4 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHROOM1Q2M3G4 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.59■□□□□ 0.25
SHROOM1Q2M3G4 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC16.59■□□□□ 0.25
SHROOM1Q2M3G4 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SHROOM1Q2M3G4 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SHROOM1Q2M3G4 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHROOM1Q2M3G4 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SHROOM1Q2M3G4 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHROOM1Q2M3G4 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SHROOM1Q2M3G4 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
SHROOM1Q2M3G4 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
SHROOM1Q2M3G4 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
SHROOM1Q2M3G4 TSPY26P-202ENST00000565928 3884 ntBASIC16.58■□□□□ 0.25
SHROOM1Q2M3G4 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.58■□□□□ 0.25
SHROOM1Q2M3G4 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
SHROOM1Q2M3G4 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC16.58■□□□□ 0.25
SHROOM1Q2M3G4 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC16.58■□□□□ 0.25
SHROOM1Q2M3G4 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SHROOM1Q2M3G4 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SHROOM1Q2M3G4 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SHROOM1Q2M3G4 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SHROOM1Q2M3G4 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
SHROOM1Q2M3G4 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SHROOM1Q2M3G4 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SHROOM1Q2M3G4 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SHROOM1Q2M3G4 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC16.58■□□□□ 0.24
SHROOM1Q2M3G4 RPS23-204ENST00000507980 836 ntTSL 2 BASIC16.58■□□□□ 0.24
SHROOM1Q2M3G4 AL132994.1-201ENST00000554098 400 ntBASIC16.58■□□□□ 0.24
SHROOM1Q2M3G4 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC16.58■□□□□ 0.24
SHROOM1Q2M3G4 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC16.58■□□□□ 0.24
SHROOM1Q2M3G4 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC16.58■□□□□ 0.24
SHROOM1Q2M3G4 NAMA-206ENST00000605377 509 ntTSL 5 BASIC16.58■□□□□ 0.24
SHROOM1Q2M3G4 AL118522.1-201ENST00000611368 560 ntBASIC16.58■□□□□ 0.24
SHROOM1Q2M3G4 HPX-213ENST00000615166 826 ntTSL 5 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms