Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC17.22■□□□□ 0.35
RFX7Q2KHR2 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RFX7Q2KHR2 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFX7Q2KHR2 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RFX7Q2KHR2 UCKL1-AS1-201ENST00000623569 3602 ntBASIC17.22■□□□□ 0.35
RFX7Q2KHR2 RPL13AP3-202ENST00000494676 1473 ntBASIC17.22■□□□□ 0.35
RFX7Q2KHR2 LINC01230-201ENST00000625222 3017 ntBASIC17.22■□□□□ 0.35
RFX7Q2KHR2 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC17.22■□□□□ 0.35
RFX7Q2KHR2 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFX7Q2KHR2 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC17.21■□□□□ 0.35
RFX7Q2KHR2 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFX7Q2KHR2 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFX7Q2KHR2 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFX7Q2KHR2 BRD7P5-201ENST00000299197 1822 ntBASIC17.21■□□□□ 0.35
RFX7Q2KHR2 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RFX7Q2KHR2 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
RFX7Q2KHR2 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFX7Q2KHR2 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RFX7Q2KHR2 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFX7Q2KHR2 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RFX7Q2KHR2 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RFX7Q2KHR2 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC17.21■□□□□ 0.35
RFX7Q2KHR2 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC17.21■□□□□ 0.35
RFX7Q2KHR2 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC17.21■□□□□ 0.35
RFX7Q2KHR2 CHCHD2P9-201ENST00000461726 456 ntBASIC17.21■□□□□ 0.35
RFX7Q2KHR2 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC17.21■□□□□ 0.35
RFX7Q2KHR2 AP002803.1-201ENST00000528836 498 ntBASIC17.21■□□□□ 0.35
RFX7Q2KHR2 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC17.21■□□□□ 0.35
RFX7Q2KHR2 AC007326.1-201ENST00000604539 458 ntBASIC17.21■□□□□ 0.35
RFX7Q2KHR2 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFX7Q2KHR2 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RFX7Q2KHR2 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFX7Q2KHR2 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.21■□□□□ 0.35
RFX7Q2KHR2 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFX7Q2KHR2 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFX7Q2KHR2 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFX7Q2KHR2 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC17.21■□□□□ 0.35
RFX7Q2KHR2 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
RFX7Q2KHR2 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RFX7Q2KHR2 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFX7Q2KHR2 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFX7Q2KHR2 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RFX7Q2KHR2 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
RFX7Q2KHR2 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RFX7Q2KHR2 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC17.21■□□□□ 0.34
RFX7Q2KHR2 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
RFX7Q2KHR2 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RFX7Q2KHR2 GOLGA8EP-201ENST00000530246 1959 ntBASIC17.2■□□□□ 0.34
RFX7Q2KHR2 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RFX7Q2KHR2 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
RFX7Q2KHR2 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFX7Q2KHR2 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFX7Q2KHR2 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RFX7Q2KHR2 RCC2P1-201ENST00000452257 1476 ntBASIC17.2■□□□□ 0.34
RFX7Q2KHR2 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFX7Q2KHR2 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC17.2■□□□□ 0.34
RFX7Q2KHR2 RN7SL81P-201ENST00000493781 261 ntBASIC17.2■□□□□ 0.34
RFX7Q2KHR2 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC17.2■□□□□ 0.34
RFX7Q2KHR2 AC135983.4-201ENST00000564116 1262 ntBASIC17.2■□□□□ 0.34
RFX7Q2KHR2 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC17.2■□□□□ 0.34
RFX7Q2KHR2 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC17.2■□□□□ 0.34
RFX7Q2KHR2 AC005618.3-201ENST00000624928 458 ntBASIC17.2■□□□□ 0.34
RFX7Q2KHR2 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFX7Q2KHR2 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RFX7Q2KHR2 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFX7Q2KHR2 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFX7Q2KHR2 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFX7Q2KHR2 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC17.2■□□□□ 0.34
RFX7Q2KHR2 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFX7Q2KHR2 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RFX7Q2KHR2 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFX7Q2KHR2 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RFX7Q2KHR2 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFX7Q2KHR2 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC17.2■□□□□ 0.34
RFX7Q2KHR2 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFX7Q2KHR2 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFX7Q2KHR2 NORAD-201ENST00000565493 5339 ntBASIC17.2■□□□□ 0.34
RFX7Q2KHR2 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFX7Q2KHR2 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RFX7Q2KHR2 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
RFX7Q2KHR2 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RFX7Q2KHR2 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFX7Q2KHR2 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
RFX7Q2KHR2 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
RFX7Q2KHR2 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
RFX7Q2KHR2 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RFX7Q2KHR2 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RFX7Q2KHR2 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RFX7Q2KHR2 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC17.19■□□□□ 0.34
RFX7Q2KHR2 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC17.19■□□□□ 0.34
RFX7Q2KHR2 AL627422.1-201ENST00000434104 580 ntBASIC17.19■□□□□ 0.34
RFX7Q2KHR2 RN7SL8P-201ENST00000461771 266 ntBASIC17.19■□□□□ 0.34
RFX7Q2KHR2 RN7SL530P-201ENST00000485097 298 ntBASIC17.19■□□□□ 0.34
RFX7Q2KHR2 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC17.19■□□□□ 0.34
RFX7Q2KHR2 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RFX7Q2KHR2 KRT8P1-201ENST00000557533 1207 ntBASIC17.19■□□□□ 0.34
RFX7Q2KHR2 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RFX7Q2KHR2 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC17.19■□□□□ 0.34
RFX7Q2KHR2 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC17.19■□□□□ 0.34
RFX7Q2KHR2 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms