Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC12.2□□□□□ -0.46
SSBP1Q04837 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC12.2□□□□□ -0.46
SSBP1Q04837 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC12.2□□□□□ -0.46
SSBP1Q04837 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC12.2□□□□□ -0.46
SSBP1Q04837 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.2□□□□□ -0.46
SSBP1Q04837 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC12.2□□□□□ -0.46
SSBP1Q04837 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC12.2□□□□□ -0.46
SSBP1Q04837 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC12.2□□□□□ -0.46
SSBP1Q04837 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC12.2□□□□□ -0.46
SSBP1Q04837 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC12.2□□□□□ -0.46
SSBP1Q04837 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC12.2□□□□□ -0.46
SSBP1Q04837 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC12.2□□□□□ -0.46
SSBP1Q04837 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC12.2□□□□□ -0.46
SSBP1Q04837 LINC02084-201ENST00000606069 1096 ntBASIC12.2□□□□□ -0.46
SSBP1Q04837 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC12.2□□□□□ -0.46
SSBP1Q04837 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
SSBP1Q04837 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP1Q04837 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP1Q04837 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
SSBP1Q04837 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP1Q04837 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC12.2□□□□□ -0.46
SSBP1Q04837 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP1Q04837 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC12.2□□□□□ -0.46
SSBP1Q04837 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP1Q04837 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP1Q04837 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC12.2□□□□□ -0.46
SSBP1Q04837 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP1Q04837 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP1Q04837 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP1Q04837 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP1Q04837 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC12.2□□□□□ -0.46
SSBP1Q04837 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP1Q04837 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP1Q04837 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP1Q04837 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP1Q04837 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
SSBP1Q04837 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
SSBP1Q04837 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SSBP1Q04837 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP1Q04837 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP1Q04837 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP1Q04837 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP1Q04837 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP1Q04837 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP1Q04837 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
SSBP1Q04837 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC12.19□□□□□ -0.46
SSBP1Q04837 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP1Q04837 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP1Q04837 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.19□□□□□ -0.46
SSBP1Q04837 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP1Q04837 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC12.19□□□□□ -0.46
SSBP1Q04837 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP1Q04837 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
SSBP1Q04837 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.19□□□□□ -0.46
SSBP1Q04837 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC12.19□□□□□ -0.46
SSBP1Q04837 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP1Q04837 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP1Q04837 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP1Q04837 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
SSBP1Q04837 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP1Q04837 C1QBPP1-201ENST00000400117 770 ntBASIC12.19□□□□□ -0.46
SSBP1Q04837 SNORA50C-201ENST00000408535 133 ntBASIC12.19□□□□□ -0.46
SSBP1Q04837 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC12.19□□□□□ -0.46
SSBP1Q04837 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC12.19□□□□□ -0.46
SSBP1Q04837 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC12.19□□□□□ -0.46
SSBP1Q04837 CNN2P2-201ENST00000443536 909 ntBASIC12.19□□□□□ -0.46
SSBP1Q04837 CNN2P3-201ENST00000450201 906 ntBASIC12.19□□□□□ -0.46
SSBP1Q04837 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC12.19□□□□□ -0.46
SSBP1Q04837 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP1Q04837 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP1Q04837 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP1Q04837 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC12.19□□□□□ -0.46
SSBP1Q04837 KRT18P58-201ENST00000527480 1120 ntBASIC12.19□□□□□ -0.46
SSBP1Q04837 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC12.19□□□□□ -0.46
SSBP1Q04837 KRT126P-201ENST00000549467 1181 ntBASIC12.19□□□□□ -0.46
SSBP1Q04837 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC12.19□□□□□ -0.46
SSBP1Q04837 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC12.19□□□□□ -0.46
SSBP1Q04837 AL136317.3-201ENST00000618497 906 ntBASIC12.19□□□□□ -0.46
SSBP1Q04837 SNORA50.1-201ENST00000628590 135 ntBASIC12.19□□□□□ -0.46
SSBP1Q04837 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC12.19□□□□□ -0.46
SSBP1Q04837 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC12.19□□□□□ -0.46
SSBP1Q04837 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC12.19□□□□□ -0.46
SSBP1Q04837 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC12.19□□□□□ -0.46
SSBP1Q04837 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
SSBP1Q04837 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP1Q04837 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC12.19□□□□□ -0.46
SSBP1Q04837 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
SSBP1Q04837 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP1Q04837 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
SSBP1Q04837 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP1Q04837 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP1Q04837 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP1Q04837 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SSBP1Q04837 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC12.19□□□□□ -0.46
SSBP1Q04837 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSBP1Q04837 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC12.18□□□□□ -0.46
SSBP1Q04837 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSBP1Q04837 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSBP1Q04837 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SSBP1Q04837 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms