Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 PEBP1P2-201ENST00000603980 558 ntBASIC13.78□□□□□ -0.2
CLDN6P56747 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CLDN6P56747 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC13.78□□□□□ -0.2
CLDN6P56747 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CLDN6P56747 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN6P56747 WASH3P-207ENST00000560956 1394 ntBASIC13.78□□□□□ -0.2
CLDN6P56747 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN6P56747 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC13.78□□□□□ -0.2
CLDN6P56747 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC13.78□□□□□ -0.2
CLDN6P56747 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN6P56747 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN6P56747 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN6P56747 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN6P56747 AC015688.4-201ENST00000580780 1647 ntBASIC13.78□□□□□ -0.2
CLDN6P56747 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC13.78□□□□□ -0.2
CLDN6P56747 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN6P56747 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.78□□□□□ -0.2
CLDN6P56747 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
CLDN6P56747 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.78□□□□□ -0.2
CLDN6P56747 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.78□□□□□ -0.2
CLDN6P56747 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN6P56747 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN6P56747 AGGF1P1-201ENST00000509500 2073 ntBASIC13.78□□□□□ -0.2
CLDN6P56747 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CLDN6P56747 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN6P56747 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN6P56747 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.78□□□□□ -0.2
CLDN6P56747 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CLDN6P56747 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
CLDN6P56747 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CLDN6P56747 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.77□□□□□ -0.2
CLDN6P56747 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.77□□□□□ -0.2
CLDN6P56747 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.2
CLDN6P56747 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CLDN6P56747 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN6P56747 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN6P56747 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN6P56747 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN6P56747 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN6P56747 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN6P56747 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
CLDN6P56747 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN6P56747 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN6P56747 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN6P56747 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
CLDN6P56747 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN6P56747 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC13.77□□□□□ -0.21
CLDN6P56747 CTBP2P8-201ENST00000422584 1330 ntBASIC13.77□□□□□ -0.21
CLDN6P56747 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN6P56747 ACE3P-201ENST00000423435 1973 ntBASIC13.77□□□□□ -0.21
CLDN6P56747 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC13.77□□□□□ -0.21
CLDN6P56747 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC13.77□□□□□ -0.21
CLDN6P56747 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.77□□□□□ -0.21
CLDN6P56747 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN6P56747 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN6P56747 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CLDN6P56747 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC13.77□□□□□ -0.21
CLDN6P56747 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN6P56747 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN6P56747 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN6P56747 AC226150.1-201ENST00000544259 466 ntBASIC13.77□□□□□ -0.21
CLDN6P56747 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC13.77□□□□□ -0.21
CLDN6P56747 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC13.77□□□□□ -0.21
CLDN6P56747 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC13.77□□□□□ -0.21
CLDN6P56747 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN6P56747 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN6P56747 SIGLEC22P-201ENST00000599104 714 ntBASIC13.77□□□□□ -0.21
CLDN6P56747 DGAT2L7P-201ENST00000602462 744 ntBASIC13.77□□□□□ -0.21
CLDN6P56747 AC140113.1-201ENST00000603467 169 ntBASIC13.77□□□□□ -0.21
CLDN6P56747 AL139339.2-201ENST00000608063 657 ntBASIC13.77□□□□□ -0.21
CLDN6P56747 AL118522.1-201ENST00000611368 560 ntBASIC13.77□□□□□ -0.21
CLDN6P56747 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN6P56747 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN6P56747 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
CLDN6P56747 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN6P56747 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN6P56747 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CLDN6P56747 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN6P56747 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN6P56747 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN6P56747 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CLDN6P56747 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CLDN6P56747 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN6P56747 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.76□□□□□ -0.21
CLDN6P56747 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.76□□□□□ -0.21
CLDN6P56747 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN6P56747 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN6P56747 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN6P56747 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.76□□□□□ -0.21
CLDN6P56747 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN6P56747 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN6P56747 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
CLDN6P56747 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.76□□□□□ -0.21
CLDN6P56747 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN6P56747 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN6P56747 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN6P56747 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN6P56747 TEKT4P2-202ENST00000559466 1312 ntBASIC13.76□□□□□ -0.21
CLDN6P56747 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN6P56747 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms