Protein–RNA interactions for Protein: P55008

AIF1, Allograft inflammatory factor 1, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AIF1P55008 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AIF1P55008 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
AIF1P55008 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
AIF1P55008 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AIF1P55008 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AIF1P55008 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
AIF1P55008 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
AIF1P55008 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AIF1P55008 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
AIF1P55008 LINC00115-201ENST00000473798 1317 ntBASIC14.78□□□□□ -0.04
AIF1P55008 TUBBP5-203ENST00000508529 1334 ntBASIC14.78□□□□□ -0.04
AIF1P55008 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
AIF1P55008 HNRNPA1P41-201ENST00000397777 928 ntBASIC14.78□□□□□ -0.04
AIF1P55008 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AIF1P55008 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.78□□□□□ -0.04
AIF1P55008 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
AIF1P55008 BX284668.4-201ENST00000453917 508 ntBASIC14.78□□□□□ -0.04
AIF1P55008 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AIF1P55008 CHCHD2P2-201ENST00000503744 321 ntBASIC14.78□□□□□ -0.04
AIF1P55008 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC14.78□□□□□ -0.04
AIF1P55008 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
AIF1P55008 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
AIF1P55008 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
AIF1P55008 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
AIF1P55008 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.78□□□□□ -0.04
AIF1P55008 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
AIF1P55008 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC14.78□□□□□ -0.04
AIF1P55008 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.78□□□□□ -0.04
AIF1P55008 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AIF1P55008 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
AIF1P55008 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AIF1P55008 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
AIF1P55008 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
AIF1P55008 AL157791.1-201ENST00000553667 1699 ntBASIC14.77□□□□□ -0.04
AIF1P55008 LINC01165-201ENST00000445190 1623 ntBASIC14.77□□□□□ -0.04
AIF1P55008 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.77□□□□□ -0.04
AIF1P55008 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
AIF1P55008 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC14.77□□□□□ -0.04
AIF1P55008 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
AIF1P55008 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.77□□□□□ -0.04
AIF1P55008 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
AIF1P55008 AC061965.1-201ENST00000560524 1465 ntBASIC14.77□□□□□ -0.04
AIF1P55008 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
AIF1P55008 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
AIF1P55008 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.04
AIF1P55008 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
AIF1P55008 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
AIF1P55008 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
AIF1P55008 GOLGA8EP-201ENST00000530246 1959 ntBASIC14.77□□□□□ -0.04
AIF1P55008 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
AIF1P55008 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
AIF1P55008 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
AIF1P55008 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
AIF1P55008 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
AIF1P55008 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
AIF1P55008 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
AIF1P55008 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
AIF1P55008 RNA5SP359-201ENST00000364838 113 ntBASIC14.77□□□□□ -0.05
AIF1P55008 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
AIF1P55008 MIR1247-201ENST00000408206 136 ntBASIC14.77□□□□□ -0.05
AIF1P55008 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC14.77□□□□□ -0.05
AIF1P55008 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC14.77□□□□□ -0.05
AIF1P55008 RN7SL277P-201ENST00000481521 288 ntBASIC14.77□□□□□ -0.05
AIF1P55008 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC14.77□□□□□ -0.05
AIF1P55008 ZNF767P-206ENST00000513792 565 ntBASIC14.77□□□□□ -0.05
AIF1P55008 MIR4538-201ENST00000581377 78 ntBASIC14.77□□□□□ -0.05
AIF1P55008 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC14.77□□□□□ -0.05
AIF1P55008 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC14.77□□□□□ -0.05
AIF1P55008 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
AIF1P55008 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
AIF1P55008 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC14.77□□□□□ -0.05
AIF1P55008 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
AIF1P55008 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
AIF1P55008 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14.77□□□□□ -0.05
AIF1P55008 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC14.77□□□□□ -0.05
AIF1P55008 AC041040.2-201ENST00000622926 2899 ntBASIC14.77□□□□□ -0.05
AIF1P55008 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.77□□□□□ -0.05
AIF1P55008 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
AIF1P55008 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
AIF1P55008 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.76□□□□□ -0.05
AIF1P55008 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.76□□□□□ -0.05
AIF1P55008 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
AIF1P55008 RCC2P1-201ENST00000452257 1476 ntBASIC14.76□□□□□ -0.05
AIF1P55008 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
AIF1P55008 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
AIF1P55008 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
AIF1P55008 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
AIF1P55008 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
AIF1P55008 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
AIF1P55008 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
AIF1P55008 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
AIF1P55008 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
AIF1P55008 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC14.76□□□□□ -0.05
AIF1P55008 AC020907.1-201ENST00000616460 1350 ntBASIC14.76□□□□□ -0.05
AIF1P55008 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.76□□□□□ -0.05
AIF1P55008 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
AIF1P55008 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
AIF1P55008 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
AIF1P55008 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
AIF1P55008 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms