Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC15.28■□□□□ 0.04
CACNA2D1P54289 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CACNA2D1P54289 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CACNA2D1P54289 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC15.28■□□□□ 0.04
CACNA2D1P54289 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CACNA2D1P54289 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CACNA2D1P54289 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
CACNA2D1P54289 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CACNA2D1P54289 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CACNA2D1P54289 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CACNA2D1P54289 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC15.28■□□□□ 0.04
CACNA2D1P54289 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CACNA2D1P54289 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CACNA2D1P54289 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CACNA2D1P54289 AP002353.1-201ENST00000528257 1599 ntBASIC15.28■□□□□ 0.04
CACNA2D1P54289 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC15.28■□□□□ 0.04
CACNA2D1P54289 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC15.28■□□□□ 0.04
CACNA2D1P54289 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CACNA2D1P54289 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CACNA2D1P54289 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CACNA2D1P54289 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
CACNA2D1P54289 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CACNA2D1P54289 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CACNA2D1P54289 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CACNA2D1P54289 DGCR9-201ENST00000609630 2415 ntBASIC15.27■□□□□ 0.04
CACNA2D1P54289 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CACNA2D1P54289 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CACNA2D1P54289 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CACNA2D1P54289 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.27■□□□□ 0.04
CACNA2D1P54289 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CACNA2D1P54289 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC15.27■□□□□ 0.04
CACNA2D1P54289 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CACNA2D1P54289 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CACNA2D1P54289 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CACNA2D1P54289 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.27■□□□□ 0.04
CACNA2D1P54289 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CACNA2D1P54289 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
CACNA2D1P54289 AC015909.3-201ENST00000572855 1794 ntBASIC15.27■□□□□ 0.04
CACNA2D1P54289 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CACNA2D1P54289 AC239868.1-201ENST00000369385 493 ntBASIC15.27■□□□□ 0.04
CACNA2D1P54289 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CACNA2D1P54289 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CACNA2D1P54289 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC15.27■□□□□ 0.04
CACNA2D1P54289 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC15.27■□□□□ 0.04
CACNA2D1P54289 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC15.27■□□□□ 0.04
CACNA2D1P54289 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CACNA2D1P54289 AC245884.6-201ENST00000515672 1067 ntBASIC15.27■□□□□ 0.04
CACNA2D1P54289 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC15.27■□□□□ 0.04
CACNA2D1P54289 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CACNA2D1P54289 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC15.27■□□□□ 0.04
CACNA2D1P54289 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC15.27■□□□□ 0.04
CACNA2D1P54289 AC005586.2-201ENST00000563946 837 ntBASIC15.27■□□□□ 0.04
CACNA2D1P54289 FGFR3P5-201ENST00000564496 886 ntBASIC15.27■□□□□ 0.04
CACNA2D1P54289 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC15.27■□□□□ 0.04
CACNA2D1P54289 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC15.27■□□□□ 0.04
CACNA2D1P54289 CU633904.3-201ENST00000624042 1029 ntBASIC15.27■□□□□ 0.04
CACNA2D1P54289 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CACNA2D1P54289 AC126335.2-201ENST00000623362 4637 ntBASIC15.27■□□□□ 0.03
CACNA2D1P54289 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
CACNA2D1P54289 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
CACNA2D1P54289 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CACNA2D1P54289 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CACNA2D1P54289 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
CACNA2D1P54289 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
CACNA2D1P54289 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
CACNA2D1P54289 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CACNA2D1P54289 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.27■□□□□ 0.03
CACNA2D1P54289 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.27■□□□□ 0.03
CACNA2D1P54289 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CACNA2D1P54289 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CACNA2D1P54289 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC15.27■□□□□ 0.03
CACNA2D1P54289 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CACNA2D1P54289 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CACNA2D1P54289 STK26-204ENST00000481105 1835 ntTSL 2 BASIC15.27■□□□□ 0.03
CACNA2D1P54289 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CACNA2D1P54289 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC15.26■□□□□ 0.03
CACNA2D1P54289 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CACNA2D1P54289 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CACNA2D1P54289 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CACNA2D1P54289 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC15.26■□□□□ 0.03
CACNA2D1P54289 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CACNA2D1P54289 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.26■□□□□ 0.03
CACNA2D1P54289 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CACNA2D1P54289 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CACNA2D1P54289 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CACNA2D1P54289 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
CACNA2D1P54289 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
CACNA2D1P54289 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CACNA2D1P54289 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC15.26■□□□□ 0.03
CACNA2D1P54289 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CACNA2D1P54289 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC15.26■□□□□ 0.03
CACNA2D1P54289 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CACNA2D1P54289 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CACNA2D1P54289 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CACNA2D1P54289 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC15.26■□□□□ 0.03
CACNA2D1P54289 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC15.26■□□□□ 0.03
CACNA2D1P54289 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC15.26■□□□□ 0.03
CACNA2D1P54289 AC116345.2-201ENST00000512837 523 ntBASIC15.26■□□□□ 0.03
CACNA2D1P54289 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC15.26■□□□□ 0.03
CACNA2D1P54289 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms