Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AL591424.3-201ENST00000614278 872 ntBASIC17.38■□□□□ 0.37
NUP98P52948 AC113385.2-201ENST00000614465 762 ntBASIC17.38■□□□□ 0.37
NUP98P52948 MIR8071-1-201ENST00000616769 65 ntBASIC17.38■□□□□ 0.37
NUP98P52948 MIR8071-2-201ENST00000616772 65 ntBASIC17.38■□□□□ 0.37
NUP98P52948 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC17.38■□□□□ 0.37
NUP98P52948 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC17.38■□□□□ 0.37
NUP98P52948 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
NUP98P52948 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NUP98P52948 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
NUP98P52948 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NUP98P52948 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NUP98P52948 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NUP98P52948 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
NUP98P52948 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NUP98P52948 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC17.37■□□□□ 0.37
NUP98P52948 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC17.37■□□□□ 0.37
NUP98P52948 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC17.37■□□□□ 0.37
NUP98P52948 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NUP98P52948 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC17.37■□□□□ 0.37
NUP98P52948 PGK1P2-201ENST00000431702 1214 ntBASIC17.37■□□□□ 0.37
NUP98P52948 FAU-202ENST00000434372 533 ntTSL 2 BASIC17.37■□□□□ 0.37
NUP98P52948 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NUP98P52948 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NUP98P52948 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NUP98P52948 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC17.37■□□□□ 0.37
NUP98P52948 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC17.37■□□□□ 0.37
NUP98P52948 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC17.37■□□□□ 0.37
NUP98P52948 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NUP98P52948 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC17.37■□□□□ 0.37
NUP98P52948 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NUP98P52948 RCC2P5-201ENST00000492126 1487 ntBASIC17.37■□□□□ 0.37
NUP98P52948 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NUP98P52948 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC17.37■□□□□ 0.37
NUP98P52948 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
NUP98P52948 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NUP98P52948 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NUP98P52948 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NUP98P52948 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
NUP98P52948 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NUP98P52948 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NUP98P52948 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC17.37■□□□□ 0.37
NUP98P52948 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NUP98P52948 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NUP98P52948 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
NUP98P52948 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NUP98P52948 MRPL35-201ENST00000254644 1061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NUP98P52948 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
NUP98P52948 SNU13-204ENST00000402458 462 ntTSL 3 BASIC17.37■□□□□ 0.37
NUP98P52948 RPL10-203ENST00000406022 748 ntTSL 3 BASIC17.37■□□□□ 0.37
NUP98P52948 AC104961.1-201ENST00000427605 771 ntBASIC17.37■□□□□ 0.37
NUP98P52948 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NUP98P52948 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC17.37■□□□□ 0.37
NUP98P52948 GDNF-207ENST00000515058 764 ntTSL 5 BASIC17.37■□□□□ 0.37
NUP98P52948 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC17.37■□□□□ 0.37
NUP98P52948 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NUP98P52948 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC17.37■□□□□ 0.37
NUP98P52948 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NUP98P52948 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
NUP98P52948 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NUP98P52948 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC17.37■□□□□ 0.37
NUP98P52948 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NUP98P52948 TCAM1P-207ENST00000485295 1537 ntBASIC17.37■□□□□ 0.37
NUP98P52948 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
NUP98P52948 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.37■□□□□ 0.37
NUP98P52948 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC17.37■□□□□ 0.37
NUP98P52948 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
NUP98P52948 AC016397.2-201ENST00000624848 1985 ntBASIC17.36■□□□□ 0.37
NUP98P52948 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.36■□□□□ 0.37
NUP98P52948 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC17.36■□□□□ 0.37
NUP98P52948 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
NUP98P52948 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NUP98P52948 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NUP98P52948 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NUP98P52948 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
NUP98P52948 AK2P2-201ENST00000439142 405 ntBASIC17.36■□□□□ 0.37
NUP98P52948 RPS18P9-201ENST00000482817 460 ntBASIC17.36■□□□□ 0.37
NUP98P52948 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC17.36■□□□□ 0.37
NUP98P52948 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC17.36■□□□□ 0.37
NUP98P52948 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC17.36■□□□□ 0.37
NUP98P52948 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
NUP98P52948 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NUP98P52948 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
NUP98P52948 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NUP98P52948 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NUP98P52948 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NUP98P52948 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NUP98P52948 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.36■□□□□ 0.37
NUP98P52948 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.36■□□□□ 0.37
NUP98P52948 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NUP98P52948 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NUP98P52948 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC17.36■□□□□ 0.37
NUP98P52948 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
NUP98P52948 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC17.36■□□□□ 0.37
NUP98P52948 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC17.36■□□□□ 0.37
NUP98P52948 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
NUP98P52948 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
NUP98P52948 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NUP98P52948 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC17.35■□□□□ 0.37
NUP98P52948 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUP98P52948 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 164.6 ms