Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NEDD4P46934 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NEDD4P46934 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC16.85■□□□□ 0.29
NEDD4P46934 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NEDD4P46934 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NEDD4P46934 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NEDD4P46934 AC010327.5-201ENST00000586923 3061 ntBASIC16.85■□□□□ 0.29
NEDD4P46934 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC16.84■□□□□ 0.29
NEDD4P46934 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NEDD4P46934 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
NEDD4P46934 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
NEDD4P46934 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
NEDD4P46934 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NEDD4P46934 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NEDD4P46934 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NEDD4P46934 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NEDD4P46934 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
NEDD4P46934 KRT8P24-201ENST00000560290 1559 ntBASIC16.84■□□□□ 0.29
NEDD4P46934 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC16.84■□□□□ 0.29
NEDD4P46934 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC16.84■□□□□ 0.29
NEDD4P46934 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NEDD4P46934 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NEDD4P46934 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NEDD4P46934 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NEDD4P46934 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NEDD4P46934 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC16.84■□□□□ 0.29
NEDD4P46934 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC16.84■□□□□ 0.29
NEDD4P46934 ELK2AP-201ENST00000392510 1007 ntBASIC16.84■□□□□ 0.29
NEDD4P46934 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC16.84■□□□□ 0.29
NEDD4P46934 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NEDD4P46934 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
NEDD4P46934 AC006335.1-201ENST00000445200 547 ntBASIC16.84■□□□□ 0.29
NEDD4P46934 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC16.84■□□□□ 0.29
NEDD4P46934 IMP3P2-201ENST00000489760 475 ntBASIC16.84■□□□□ 0.29
NEDD4P46934 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC16.84■□□□□ 0.29
NEDD4P46934 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC16.84■□□□□ 0.29
NEDD4P46934 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC16.84■□□□□ 0.29
NEDD4P46934 RTN3P1-201ENST00000536295 711 ntBASIC16.84■□□□□ 0.29
NEDD4P46934 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC16.84■□□□□ 0.29
NEDD4P46934 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
NEDD4P46934 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC16.84■□□□□ 0.29
NEDD4P46934 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC16.84■□□□□ 0.29
NEDD4P46934 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NEDD4P46934 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
NEDD4P46934 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NEDD4P46934 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC16.84■□□□□ 0.29
NEDD4P46934 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NEDD4P46934 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
NEDD4P46934 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NEDD4P46934 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NEDD4P46934 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
NEDD4P46934 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NEDD4P46934 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
NEDD4P46934 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NEDD4P46934 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC16.83■□□□□ 0.29
NEDD4P46934 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.29
NEDD4P46934 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
NEDD4P46934 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
NEDD4P46934 ARHGAP23P1-201ENST00000562773 1937 ntBASIC16.83■□□□□ 0.29
NEDD4P46934 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NEDD4P46934 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.83■□□□□ 0.29
NEDD4P46934 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NEDD4P46934 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
NEDD4P46934 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC16.83■□□□□ 0.28
NEDD4P46934 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
NEDD4P46934 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NEDD4P46934 AC103592.1-201ENST00000394513 664 ntBASIC16.83■□□□□ 0.28
NEDD4P46934 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC16.83■□□□□ 0.28
NEDD4P46934 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC16.83■□□□□ 0.28
NEDD4P46934 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC16.83■□□□□ 0.28
NEDD4P46934 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NEDD4P46934 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
NEDD4P46934 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
NEDD4P46934 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC16.83■□□□□ 0.28
NEDD4P46934 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC16.83■□□□□ 0.28
NEDD4P46934 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC16.83■□□□□ 0.28
NEDD4P46934 KRT8P1-201ENST00000557533 1207 ntBASIC16.83■□□□□ 0.28
NEDD4P46934 STUB1-204ENST00000564370 875 ntTSL 2 BASIC16.83■□□□□ 0.28
NEDD4P46934 ELP5-212ENST00000574255 671 ntTSL 2 BASIC16.83■□□□□ 0.28
NEDD4P46934 AL353770.1-201ENST00000614915 403 ntBASIC16.83■□□□□ 0.28
NEDD4P46934 MIR6769A-201ENST00000617340 73 ntBASIC16.83■□□□□ 0.28
NEDD4P46934 CU633904.3-201ENST00000624042 1029 ntBASIC16.83■□□□□ 0.28
NEDD4P46934 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
NEDD4P46934 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NEDD4P46934 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
NEDD4P46934 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
NEDD4P46934 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NEDD4P46934 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NEDD4P46934 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC16.83■□□□□ 0.28
NEDD4P46934 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
NEDD4P46934 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
NEDD4P46934 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
NEDD4P46934 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC16.83■□□□□ 0.28
NEDD4P46934 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC16.83■□□□□ 0.28
NEDD4P46934 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NEDD4P46934 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
NEDD4P46934 SHMT1P1-201ENST00000419974 1312 ntBASIC16.82■□□□□ 0.28
NEDD4P46934 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NEDD4P46934 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
NEDD4P46934 AC089987.1-201ENST00000551654 2209 ntBASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms