Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC15.07■□□□□ 0
SLC1A1P43005 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
SLC1A1P43005 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
SLC1A1P43005 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC15.07■□□□□ 0
SLC1A1P43005 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC15.07■□□□□ 0
SLC1A1P43005 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC15.07■□□□□ 0
SLC1A1P43005 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.07■□□□□ 0
SLC1A1P43005 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.07■□□□□ 0
SLC1A1P43005 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.07■□□□□ 0
SLC1A1P43005 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
SLC1A1P43005 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC15.07■□□□□ 0
SLC1A1P43005 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC15.07■□□□□ 0
SLC1A1P43005 AC022217.1-201ENST00000521069 738 ntBASIC15.07■□□□□ 0
SLC1A1P43005 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.07■□□□□ 0
SLC1A1P43005 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.07■□□□□ 0
SLC1A1P43005 AL591471.1-201ENST00000621855 229 ntBASIC15.07■□□□□ 0
SLC1A1P43005 Z98259.2-201ENST00000641583 609 ntBASIC15.07■□□□□ 0
SLC1A1P43005 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC1A1P43005 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC15.07■□□□□ 0
SLC1A1P43005 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC15.07■□□□□ 0
SLC1A1P43005 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC1A1P43005 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC15.07■□□□□ 0
SLC1A1P43005 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC15.07■□□□□ 0
SLC1A1P43005 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC1A1P43005 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
SLC1A1P43005 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC1A1P43005 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
SLC1A1P43005 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.07■□□□□ 0
SLC1A1P43005 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC15.07■□□□□ 0
SLC1A1P43005 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC1A1P43005 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
SLC1A1P43005 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC15.07■□□□□ 0
SLC1A1P43005 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
SLC1A1P43005 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
SLC1A1P43005 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC15.07■□□□□ 0
SLC1A1P43005 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC1A1P43005 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
SLC1A1P43005 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SLC1A1P43005 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SLC1A1P43005 LINC02486-201ENST00000604157 3000 ntBASIC15.06■□□□□ 0
SLC1A1P43005 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC15.06■□□□□ 0
SLC1A1P43005 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC15.06■□□□□ 0
SLC1A1P43005 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.06■□□□□ 0
SLC1A1P43005 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
SLC1A1P43005 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC1A1P43005 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC1A1P43005 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC15.06■□□□□ 0
SLC1A1P43005 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
SLC1A1P43005 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC15.06■□□□□ 0
SLC1A1P43005 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SLC1A1P43005 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC15.06■□□□□ 0
SLC1A1P43005 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SLC1A1P43005 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC1A1P43005 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SLC1A1P43005 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC15.06■□□□□ 0
SLC1A1P43005 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC1A1P43005 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.06■□□□□ 0
SLC1A1P43005 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SLC1A1P43005 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.06■□□□□ 0
SLC1A1P43005 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC1A1P43005 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SLC1A1P43005 HMGA1P1-201ENST00000415560 1062 ntBASIC15.06■□□□□ 0
SLC1A1P43005 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.06■□□□□ 0
SLC1A1P43005 AC079178.1-201ENST00000420915 656 ntBASIC15.06■□□□□ 0
SLC1A1P43005 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC1A1P43005 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC15.06■□□□□ 0
SLC1A1P43005 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC1A1P43005 KRT17P7-201ENST00000451704 1104 ntBASIC15.06■□□□□ 0
SLC1A1P43005 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
SLC1A1P43005 HNRNPA1P36-201ENST00000521313 955 ntBASIC15.06■□□□□ 0
SLC1A1P43005 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC15.06■□□□□ 0
SLC1A1P43005 AC003686.1-201ENST00000550956 1034 ntBASIC15.06■□□□□ 0
SLC1A1P43005 AC140658.4-201ENST00000561990 352 ntBASIC15.06■□□□□ 0
SLC1A1P43005 AC106886.1-201ENST00000568660 600 ntBASIC15.06■□□□□ 0
SLC1A1P43005 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC15.06■□□□□ 0
SLC1A1P43005 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.06■□□□□ 0
SLC1A1P43005 MIR4783-201ENST00000580343 82 ntBASIC15.06■□□□□ 0
SLC1A1P43005 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.06■□□□□ 0
SLC1A1P43005 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.06■□□□□ 0
SLC1A1P43005 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SLC1A1P43005 AC244157.2-201ENST00000616239 1006 ntBASIC15.06■□□□□ 0
SLC1A1P43005 CR392039.2-201ENST00000623182 509 ntBASIC15.06■□□□□ 0
SLC1A1P43005 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC1A1P43005 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SLC1A1P43005 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SLC1A1P43005 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
SLC1A1P43005 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SLC1A1P43005 RET-205ENST00000615310 4337 ntTSL 5 BASIC15.06■□□□□ 0
SLC1A1P43005 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC1A1P43005 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC1A1P43005 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC15.06■□□□□ 0
SLC1A1P43005 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC1A1P43005 AL023775.1-201ENST00000454907 1746 ntBASIC15.06■□□□□ 0
SLC1A1P43005 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC1A1P43005 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC1A1P43005 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC15.06■□□□□ 0
SLC1A1P43005 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC15.06■□□□□ 0
SLC1A1P43005 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC1A1P43005 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
SLC1A1P43005 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC15.05■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms