Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOBEC1P41238 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.03□□□□□ -0.32
APOBEC1P41238 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOBEC1P41238 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.03□□□□□ -0.32
APOBEC1P41238 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
APOBEC1P41238 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
APOBEC1P41238 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
APOBEC1P41238 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.02□□□□□ -0.32
APOBEC1P41238 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
APOBEC1P41238 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
APOBEC1P41238 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
APOBEC1P41238 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
APOBEC1P41238 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
APOBEC1P41238 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.02□□□□□ -0.32
APOBEC1P41238 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
APOBEC1P41238 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOBEC1P41238 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
APOBEC1P41238 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOBEC1P41238 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.02□□□□□ -0.33
APOBEC1P41238 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
APOBEC1P41238 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC13.02□□□□□ -0.33
APOBEC1P41238 CSH2-202ENST00000345366 598 ntTSL 5 BASIC13.02□□□□□ -0.33
APOBEC1P41238 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOBEC1P41238 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOBEC1P41238 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13.02□□□□□ -0.33
APOBEC1P41238 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOBEC1P41238 MARK2P5-201ENST00000507649 634 ntBASIC13.02□□□□□ -0.33
APOBEC1P41238 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
APOBEC1P41238 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC13.02□□□□□ -0.33
APOBEC1P41238 CSH2-206ENST00000560142 749 ntTSL 5 BASIC13.02□□□□□ -0.33
APOBEC1P41238 ARL16-210ENST00000574938 751 ntTSL 2 BASIC13.02□□□□□ -0.33
APOBEC1P41238 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC13.02□□□□□ -0.33
APOBEC1P41238 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC13.02□□□□□ -0.33
APOBEC1P41238 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOBEC1P41238 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.33
APOBEC1P41238 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
APOBEC1P41238 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOBEC1P41238 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOBEC1P41238 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
APOBEC1P41238 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
APOBEC1P41238 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC13.02□□□□□ -0.33
APOBEC1P41238 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOBEC1P41238 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
APOBEC1P41238 AC007952.5-201ENST00000572818 1486 ntBASIC13.02□□□□□ -0.33
APOBEC1P41238 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.02□□□□□ -0.33
APOBEC1P41238 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC13.02□□□□□ -0.33
APOBEC1P41238 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOBEC1P41238 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
APOBEC1P41238 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
APOBEC1P41238 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOBEC1P41238 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOBEC1P41238 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOBEC1P41238 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC13.02□□□□□ -0.33
APOBEC1P41238 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
APOBEC1P41238 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
APOBEC1P41238 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
APOBEC1P41238 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOBEC1P41238 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
APOBEC1P41238 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOBEC1P41238 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOBEC1P41238 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
APOBEC1P41238 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
APOBEC1P41238 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
APOBEC1P41238 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOBEC1P41238 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOBEC1P41238 AC041040.2-201ENST00000622926 2899 ntBASIC13.01□□□□□ -0.33
APOBEC1P41238 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
APOBEC1P41238 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOBEC1P41238 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
APOBEC1P41238 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC13.01□□□□□ -0.33
APOBEC1P41238 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC13.01□□□□□ -0.33
APOBEC1P41238 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC13.01□□□□□ -0.33
APOBEC1P41238 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC13.01□□□□□ -0.33
APOBEC1P41238 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
APOBEC1P41238 AC108725.1-201ENST00000495472 409 ntBASIC13.01□□□□□ -0.33
APOBEC1P41238 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC13.01□□□□□ -0.33
APOBEC1P41238 AL118558.3-201ENST00000607414 1079 ntBASIC13.01□□□□□ -0.33
APOBEC1P41238 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC13.01□□□□□ -0.33
APOBEC1P41238 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
APOBEC1P41238 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
APOBEC1P41238 RAN-210ENST00000541630 1475 ntTSL 2 BASIC13.01□□□□□ -0.33
APOBEC1P41238 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
APOBEC1P41238 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.01□□□□□ -0.33
APOBEC1P41238 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.01□□□□□ -0.33
APOBEC1P41238 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC13.01□□□□□ -0.33
APOBEC1P41238 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
APOBEC1P41238 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
APOBEC1P41238 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOBEC1P41238 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
APOBEC1P41238 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.01□□□□□ -0.33
APOBEC1P41238 AC011474.4-201ENST00000623523 2076 ntBASIC13.01□□□□□ -0.33
APOBEC1P41238 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOBEC1P41238 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
APOBEC1P41238 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.01□□□□□ -0.33
APOBEC1P41238 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.01□□□□□ -0.33
APOBEC1P41238 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
APOBEC1P41238 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
APOBEC1P41238 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
APOBEC1P41238 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
APOBEC1P41238 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms